CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012623.1-P	Field mustard	nucleus	97.12	98.44
CDY01512	Canola	nucleus	93.46	93.64
CDY44493	Canola	nucleus	74.04	77.62
CDX78822	Canola	nucleus	73.08	75.4
AT4G18020.1	Thale cress	nucleus	70.77	68.78
VIT_02s0012g00570.t01	Wine grape	nucleus	51.54	48.03
KRH77235	Soybean	nucleus	47.69	44.44
KRH57579	Soybean	nucleus	48.27	43.96
PGSC0003DMT400068374	Potato	nucleus	46.73	43.86
KRH28259	Soybean	nucleus	48.08	43.86
Solyc06g061030.2.1	Tomato	nucleus	46.92	43.65
KRH04301	Soybean	nucleus	48.08	43.4
PGSC0003DMT400062232	Potato	nucleus	45.58	42.32
GSMUA_Achr11P...	Banana	nucleus	38.08	41.08
Solyc08g077230.2.1	Tomato	nucleus	44.23	41.07
GSMUA_Achr2P18200_001	Banana	nucleus	40.77	38.27
CDY22303	Canola	nucleus	19.81	27.47
CDX94762	Canola	nucleus	19.81	27.47
CDY14913	Canola	nucleus	19.81	27.18
CDX96952	Canola	nucleus	17.88	25.34
CDY05773	Canola	nucleus	20.77	24.22
CDY31954	Canola	nucleus	20.58	23.78
CDX81968	Canola	nucleus	19.23	9.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	Gene3D:3.40.50.2300	GO:A0A078DN18	EnsemblPlants:CDX90427	ProteinID:CDX90427
ProteinID:CDX90427.1	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00151034001
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072
PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0004EF0BFB	SEG:seg

Description

BnaA03g43540D

Coordinates

chrLK031863:+:114092..118065

Molecular Weight (calculated)

58014.4 Da

IEP (calculated)

5.938

GRAVY (calculated)

-0.650

Length

520 amino acids

Sequence
(BLAST)

001: MVFTANDLSK WESFPKGLRV LLLDGRISAA ETRSKLESMD YIVTTFSDES EALSAVVKSP ESFHIAIVEV NTSAEDESFK YLEAAKGLLP TIMISDDHCI
101: ATTMKCIALG AVEFLQKPLS PEKLKNIWQH VVHKAFNDGG ASVSESLKPV KDSVVSMLNI DTNMTIDEKD PAPSTPQLRQ VSRLLDQENR NCSVENVNSP
201: IEKESTEDHD IGESKSVDTT NHEDNVIVKE ENGDGEKEEE QGQTEEHKQE EGETGDSVNF NKKEDETNKP INKSSGNKNL SSNKASRKKV DWTQELHKKF
301: VQAVEQLGVD QAIPSRILEL MKVDGLTRHN VASHLQKFRM HRRNILPKDD HNHRWIQSRE NHRQIQRQYN GFQQQHRPVM AYPVWGLPGV HPPGAVPPLW
401: PPALPSAGQL PPWHFKPPYP TLNGNTWGYP VGPPVTGTFF PPPITGTFST HPANQLDEEM IDQVIDQVVK EVISKPGMPL PLGLKPPSPE SVLTELSRQD
501: ISAVPSSSAS CQINGSRRLR

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.