Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062232 | Potato | nucleus | 84.46 | 84.46 |
| Solyc06g061030.2.1 | Tomato | nucleus | 64.11 | 64.22 |
| VIT_02s0012g00570.t01 | Wine grape | nucleus | 56.07 | 56.27 |
| KRH57579 | Soybean | nucleus | 53.04 | 52.01 |
| KRH77235 | Soybean | nucleus | 51.25 | 51.43 |
| KRH28259 | Soybean | nucleus | 51.61 | 50.7 |
| KRH04301 | Soybean | nucleus | 51.96 | 50.52 |
| CDY44493 | Canola | nucleus | 42.14 | 47.58 |
| Bra013277.1-P | Field mustard | nucleus | 42.68 | 47.51 |
| Bra013278.1-P | Field mustard | nucleus | 42.68 | 47.51 |
| CDX78822 | Canola | nucleus | 42.5 | 47.22 |
| AT4G18020.1 | Thale cress | nucleus | 44.11 | 46.17 |
| GSMUA_Achr11P... | Banana | nucleus | 39.64 | 46.06 |
| Bra012623.1-P | Field mustard | nucleus | 40.71 | 44.44 |
| CDX90427 | Canola | nucleus | 41.07 | 44.23 |
| CDY01512 | Canola | nucleus | 40.54 | 43.74 |
| Bra013279.1-P | Field mustard | nucleus | 22.86 | 42.81 |
| GSMUA_Achr2P18200_001 | Banana | nucleus | 42.32 | 42.78 |
| Solyc10g008160.2.1 | Tomato | mitochondrion, nucleus | 10.71 | 31.25 |
| Solyc07g053630.2.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 20.0 | 20.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR001789 |
| InterPro:IPR017930 | UniProt:K4CN83 | EMBL:KC147634 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR31312 | PANTHER:PTHR31312:SF2 | InterPro:SANT/Myb |
| SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc08g077230.2 | EnsemblPlants:Solyc08g077230.2.1 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000276C2A3 | : | : | : | : |
Description
APRR2-like protein [Source:UniProtKB/TrEMBL;Acc:K4CN83]
Coordinates
chr8:-:61141194..61147022
Molecular Weight (calculated)
62478.4 Da
IEP (calculated)
6.315
GRAVY (calculated)
-0.639
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MICIENELLG WKDFPKGLKV LLLDEDSNSA AEMKSRLEKM DYIVYSFCNE SEALTAISSK SEGFHVAIVE VSAGNSDGVL RFLESAKDLP TIMTSNIHSL
101: STMMKCIALG AVEFLQKPLS DDKLKNIWQH VVHKAFNTRK DVSKSLEPVK DSVLSMLQLQ LEMGEADDKS SNGTEPPTAV AESNTEQSSG CDKYPAPSTP
201: QLKQGVRSVD DGDCHDHTIF STDQDSGEHD ADTKSVETTY NNSLAENNVQ TSPTVQQGDI ILKEDNVSSP DLKTETDIAT TSRSNDCPDN SIMHSAEPSK
301: ASGPHSSNGT KSNRKKIKVD WTPELHKKFV QAVEQLGIDQ AIPSRILDLM KVEGLTRHNV ASHLQKYRMH RKQILPKEVE RRWPNPQPID SVQRSYYPHK
401: PIMTFPQYHS NHVAPGGQFY PAWVTPASYP NGLQVWGSPY YPGWKPAETW HWTPRPELHA DTWGSPIMSP SLGSYPPYPQ NAGVYRPHGT HNRYSMLEKS
501: FDLHPADEVI DKVVKEAITK PWLPLPLGLK APSTESVLDE LSRQGISTIP SQINDSRCRR
101: STMMKCIALG AVEFLQKPLS DDKLKNIWQH VVHKAFNTRK DVSKSLEPVK DSVLSMLQLQ LEMGEADDKS SNGTEPPTAV AESNTEQSSG CDKYPAPSTP
201: QLKQGVRSVD DGDCHDHTIF STDQDSGEHD ADTKSVETTY NNSLAENNVQ TSPTVQQGDI ILKEDNVSSP DLKTETDIAT TSRSNDCPDN SIMHSAEPSK
301: ASGPHSSNGT KSNRKKIKVD WTPELHKKFV QAVEQLGIDQ AIPSRILDLM KVEGLTRHNV ASHLQKYRMH RKQILPKEVE RRWPNPQPID SVQRSYYPHK
401: PIMTFPQYHS NHVAPGGQFY PAWVTPASYP NGLQVWGSPY YPGWKPAETW HWTPRPELHA DTWGSPIMSP SLGSYPPYPQ NAGVYRPHGT HNRYSMLEKS
501: FDLHPADEVI DKVVKEAITK PWLPLPLGLK APSTESVLDE LSRQGISTIP SQINDSRCRR
001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR
Arabidopsis Description
APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.