Factsheet for Bra013278.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013277.1-P	Field mustard	nucleus	100.0	100.0
CDX78822	Canola	nucleus	98.41	98.21
Bra013279.1-P	Field mustard	nucleus	53.08	89.3
Bra012623.1-P	Field mustard	nucleus	75.35	73.88
AT4G18020.1	Thale cress	nucleus	73.96	69.53
VIT_02s0012g00570.t01	Wine grape	nucleus	54.27	48.92
KRH77235	Soybean	nucleus	51.69	46.59
KRH04301	Soybean	nucleus	53.28	46.53
KRH57579	Soybean	nucleus	52.49	46.23
KRH28259	Soybean	nucleus	51.89	45.79
PGSC0003DMT400068374	Potato	nucleus	49.11	44.58
Solyc06g061030.2.1	Tomato	nucleus	48.51	43.65
Solyc08g077230.2.1	Tomato	nucleus	47.51	42.68
PGSC0003DMT400062232	Potato	nucleus	47.32	42.5
GSMUA_Achr11P...	Banana	nucleus	40.16	41.91
GSMUA_Achr2P18200_001	Banana	nucleus	44.14	40.07
Bra033726.1-P	Field mustard	nucleus	20.48	27.47
Bra036015.1-P	Field mustard	nucleus	19.09	25.95
Bra036482.1-P	Field mustard	nucleus	21.27	24.65
Bra031129.1-P	Field mustard	nucleus	19.09	23.08

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra013278	EnsemblPlants:Bra013278.1	EnsemblPlants:Bra013278.1-P
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M4D9W7	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312
PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557
UniParc:UPI0002545EAF	SEG:seg	:	:	:	:

Description

AT4G18020 (E=2e-185) APRR2, PRR2 | APRR2; transcription factor/ two-component response regulator

Coordinates

chrA01:-:4696156..4698795

Molecular Weight (calculated)

56136.5 Da

IEP (calculated)

6.607

GRAVY (calculated)

-0.603

Length

503 amino acids

Sequence
(BLAST)

001: MVFTSNDISK WENFPKGLRV LLLDCGDGIS AAETRSKLES MDYIVTTFTD GTEALSAVIK SLESFHIAIV EVNTSDENES FKFLEAAKDH LPTIMISNDH
101: CITTTMKCIA LGAVEFLQKP LSPDKLKNIW QHVVHKAFND GGTDVSESLK PVKESVVSML HLDTDMTIDE KDSAPLTPQL KQVSRLLDGG DRQENINSST
201: EKENMEDQDI GESKSVDTTN HDDNVIVKEE KLDGETGDTK SEKTDSVKFQ KKEDETTKHN NKSTGIKNLS GNKPSRKKVD WTQELHKKFV QAVDQLGVDQ
301: AIPSRILELM KVDGLTRHNV ASHLQKFRMH RRNILPKEDH NHRYIQSREN HRQIQRQYNG FQQQHRPVMA YPVWGLPGVH PPGAVPPLWP PPLQSSGQLP
401: PWHWRPPYPT VNVNAWGCPI VPPVTGPFSS PTVTGTFSTP PATQLDEEMV DQVVKEAISK PWLPLPLGLK PPSAESVLAE LSRQGISAVP SSSSSINGSR
501: RLR

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.