Factsheet for GSMUA_Achr2P18200_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	51.44	59.13
VIT_02s0012g00570.t01	Wine grape	nucleus	46.39	46.06
CDY44493	Canola	nucleus	40.61	45.36
CDX78822	Canola	nucleus	40.43	44.44
Bra013277.1-P	Field mustard	nucleus	40.07	44.14
Bra013278.1-P	Field mustard	nucleus	40.07	44.14
PGSC0003DMT400062232	Potato	nucleus	43.68	43.21
KRH57579	Soybean	nucleus	44.04	42.73
KRH77235	Soybean	nucleus	42.96	42.65
Solyc08g077230.2.1	Tomato	nucleus	42.78	42.32
AT4G18020.1	Thale cress	nucleus	40.61	42.06
KRH04301	Soybean	nucleus	43.14	41.49
CDY01512	Canola	nucleus	38.81	41.43
KRH28259	Soybean	nucleus	42.6	41.4
CDX90427	Canola	nucleus	38.27	40.77
Bra012623.1-P	Field mustard	nucleus	37.55	40.55
PGSC0003DMT400068374	Potato	nucleus	39.71	39.71
Bra013279.1-P	Field mustard	nucleus	21.3	39.46
Solyc06g061030.2.1	Tomato	nucleus	39.71	39.36
GSMUA_Achr7P11040_001	Banana	nucleus	19.86	25.82
GSMUA_Achr10P...	Banana	nucleus	19.68	25.47
GSMUA_Achr2P15250_001	Banana	nucleus	18.95	24.76
GSMUA_Achr6P05850_001	Banana	nucleus	18.23	22.95

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G18200_001	EnsemblPlants:GSMUA_Achr2P18200_001
EnsemblPlants:GSMUA_Achr2T18200_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M0S911	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312
PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557	UniParc:UPI0002969B33	SEG:seg	:	:	:

Description

Putative Two-component response regulator-like APRR2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G18200_001]

Coordinates

chr2:-:18642334..18646642

Molecular Weight (calculated)

62431.5 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.626

Length

554 amino acids

Sequence
(BLAST)

001: MAGSADGFVV WKDFPRGLKI LLLDKDAPSA VETKSKLEEM DYVVSLYHNE EDALEAISKE AESFHVAIVE VTTSDNCGSF RFLEMAKDIP TIVISDVHCL
101: STMMKCIALG AAEFLQKPVS EDKLRNIWQH VVQKAFNAGG NELSKSLKPI KDTVVSMLQK QSETDEHKIK EKESEKDDKY GCEKTMENDR FSAPSTPQLE
201: QGGRFPTNGE FQEITHCSIA KELPQPGKHS SSVSKSVGNT CDNSVSIANN KDVLPSKAEA EEEVNSIDGS KTDECSAVKE RFLPSHFHSV DDLQKNRLSY
301: SDGARNNRKK MKVDWTPELH RQFVQVVEQL GIDQAIPSKI VELMKVEGLT RHNVASHLQK YRMHRRHVLP KDEDRRWQAD KDPTQRGYIP RPILAYPPYH
401: TDCGAPTNQI YPFWVHPNYH THGVGQAGYT RWHPPPQSWP WKTYPVVHAD AWGCPVFVTQ YGQYPMSSPL QRSLMYSDFD TSGDSNEMFQ ESYDLHQVEE
501: AIDRSIKDVM SKPWLPLPLG LKSPSAEVVL AELHRQGICA IPPSTPSTDP HSCG

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.