CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77235	Soybean	nucleus	90.88	92.83
KRH57579	Soybean	nucleus	71.05	70.93
KRH04301	Soybean	nucleus	70.7	69.97
VIT_02s0012g00570.t01	Wine grape	nucleus	62.46	63.8
PGSC0003DMT400068374	Potato	nucleus	51.58	53.07
PGSC0003DMT400062232	Potato	nucleus	51.58	52.5
CDY44493	Canola	nucleus	45.61	52.42
Solyc06g061030.2.1	Tomato	nucleus	51.4	52.41
Bra013278.1-P	Field mustard	nucleus	45.79	51.89
Bra013277.1-P	Field mustard	nucleus	45.79	51.89
Solyc08g077230.2.1	Tomato	nucleus	50.7	51.61
CDX78822	Canola	nucleus	45.61	51.59
AT4G18020.1	Thale cress	nucleus	45.44	48.41
Bra012623.1-P	Field mustard	nucleus	43.33	48.15
CDX90427	Canola	nucleus	43.86	48.08
CDY01512	Canola	nucleus	43.33	47.59
GSMUA_Achr11P...	Banana	nucleus	37.89	44.81
Bra013279.1-P	Field mustard	nucleus	22.81	43.48
GSMUA_Achr2P18200_001	Banana	nucleus	41.4	42.6
KRH22338	Soybean	nucleus	19.3	25.23
KRH26988	Soybean	nucleus	19.47	25.17
KRH25644	Soybean	nucleus	18.77	25.0
KRH55898	Soybean	nucleus	18.07	24.18

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100784905	MapMan:15.5.2.3	Gene3D:3.40.50.2300	EMBL:ACUP02006741	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_11G041300	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:K7LMZ7	EnsemblPlants:KRH28259
ProteinID:KRH28259	ProteinID:KRH28259.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000233CCE1	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:3014232..3022465

Molecular Weight (calculated)

63672.2 Da

IEP (calculated)

6.817

GRAVY (calculated)

-0.698

Length

570 amino acids

Sequence
(BLAST)

001: MVCTANDLQG WKDFPKGLRV LLLEGDSSSA AEIREQLEAM DYKVSTFYDE NEALSALSSS PKGFHVAIVE VSTSCSLGGF KFLENAKDLP TIMTSKDQCL
101: NTMMKCIALG AVEFLSKPLS EDKLKNIWQH VVHKAFNSGE NVLSESLKPV KESVESMLQL QTDIGQDKSR ISIDLENVSR FSDNDHEQSA VCDKYPAPST
201: PQLKQGTRLL DDGDCHEQTN CSTEKESGEH DRECKSVETS CGNLNAESSP QPREPDKTLI REEDDFANVS KGESAVSLNP HNKKFLSNAD GNTSPNKTGV
301: LNDSCEIKAN RKKVKVDWTP ELHKKFVKAV EQLGIDQAIP SRILEIMKVE GLTRHNVASH LQKYRIHKRQ SAPREEDRKW HNQGDAMQRN YYMQRPIMAY
401: PPYHSHHTLS PAPIYPMWGQ PGSQTAGVQI WGHPGYPMWH PTESWHWKPY PGVHVDAWGC PLVPPPQAPC FPYNQNTPGL HNPKAVDYRF SMPRSSFEHH
501: PAEEVVDKVV KEAMSQPWLP LPLGLKPPSM DSVLAELSKQ GIPSIPLGNK GSSTPKPRRD VRPTPPPGPT

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.