CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28259	Soybean	nucleus	92.83	90.88
KRH57579	Soybean	nucleus	72.4	70.75
KRH04301	Soybean	nucleus	72.4	70.14
VIT_02s0012g00570.t01	Wine grape	nucleus	64.87	64.87
PGSC0003DMT400068374	Potato	nucleus	52.69	53.07
Solyc06g061030.2.1	Tomato	nucleus	52.69	52.59
PGSC0003DMT400062232	Potato	nucleus	52.33	52.14
CDY44493	Canola	nucleus	46.06	51.81
Bra013278.1-P	Field mustard	nucleus	46.59	51.69
Bra013277.1-P	Field mustard	nucleus	46.59	51.69
Solyc08g077230.2.1	Tomato	nucleus	51.43	51.25
CDX78822	Canola	nucleus	46.24	51.19
AT4G18020.1	Thale cress	nucleus	46.42	48.41
Bra012623.1-P	Field mustard	nucleus	43.91	47.76
CDX90427	Canola	nucleus	44.44	47.69
CDY01512	Canola	nucleus	44.09	47.4
GSMUA_Achr11P...	Banana	nucleus	38.71	44.81
Bra013279.1-P	Field mustard	nucleus	23.48	43.81
GSMUA_Achr2P18200_001	Banana	nucleus	42.65	42.96
KRH22338	Soybean	nucleus	19.35	24.77
KRH26988	Soybean	nucleus	19.53	24.72
KRH25644	Soybean	nucleus	18.82	24.53
KRH55898	Soybean	nucleus	18.1	23.71

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100779121	MapMan:15.5.2.3	Gene3D:3.40.50.2300	EMBL:ACUP02000668	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_01G200800	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:K7K4U9	EnsemblPlants:KRH77235
ProteinID:KRH77235	ProteinID:KRH77235.1	ProteinID:KRH77236.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072
PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002967EAC	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:53438446..53445054

Molecular Weight (calculated)

62437.7 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.640

Length

558 amino acids

Sequence
(BLAST)

001: MVCTANDLQE WKDFPKGLRV LLLEGDSSSA AEIREQLEAV DYNVSTFYDE NEALSALSSS PEGFHVAIVE VSTSCSLGGF KFLENSKDLP TIMTSKDQCL
101: NTMMKCIALG AVEFLSKPLS EDKLKNIWQH VVHKAFNAGA NVLSESLKPV KESVESMLQL QTENGQDKSR ISIDLENVSR FSDIDHEQSA VCDKYPAPST
201: PQLKQGTRLL DDGDCHDQTN CSTEKESVEH DGECKSVETL CENLNAESSP QPREPDKTLI KEEEDFANGS RGESAVSLSP NNKKFLSNAD GNTSPNRTGV
301: LNDSCEIKAN RKKMKVDWTP ELHKKFVKAV EQLGIDQAIP SRILEIMKVE GLTRHNVASH LQKYRIHKRQ SAPREEDRKW HNQRDAMQRN YYMQRPIMAY
401: PPYHSNHTLS PAPIYPMWGQ PGSQTAGVQI WGHPGYHIWH PTESCHWKPY QGVHVDAWGC PLLPAPQAPC FPYNQNIPGL HNPKAVDYRF GMPQSSFEHH
501: PAEEVVDKVV KEAISKPWLP LPLGLKPPSM DSVLAELSKQ GISGIPLGNK RSSTPKLR

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.