CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04301	Soybean	nucleus	88.62	87.85
KRH77235	Soybean	nucleus	70.75	72.4
KRH28259	Soybean	nucleus	70.93	71.05
VIT_02s0012g00570.t01	Wine grape	nucleus	61.82	63.26
PGSC0003DMT400062232	Potato	nucleus	52.19	53.21
Solyc08g077230.2.1	Tomato	nucleus	52.01	53.04
PGSC0003DMT400068374	Potato	nucleus	51.31	52.89
CDY44493	Canola	nucleus	45.88	52.82
Bra013278.1-P	Field mustard	nucleus	46.23	52.49
Bra013277.1-P	Field mustard	nucleus	46.23	52.49
Solyc06g061030.2.1	Tomato	nucleus	51.31	52.41
CDX78822	Canola	nucleus	46.06	52.18
AT4G18020.1	Thale cress	nucleus	46.23	49.35
Bra012623.1-P	Field mustard	nucleus	43.61	48.54
CDX90427	Canola	nucleus	43.96	48.27
CDY01512	Canola	nucleus	43.61	47.98
GSMUA_Achr11P...	Banana	nucleus	39.75	47.1
Bra013279.1-P	Field mustard	nucleus	23.29	44.48
GSMUA_Achr2P18200_001	Banana	nucleus	42.73	44.04
KRH55898	Soybean	nucleus	19.09	25.59
KRH25644	Soybean	nucleus	18.91	25.23
KRH26988	Soybean	nucleus	19.44	25.17
KRH22338	Soybean	nucleus	18.91	24.77

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100820385	MapMan:15.5.2.3	Gene3D:3.40.50.2300	EMBL:ACUP02002857	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_05G070200	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:K7KNA7	EnsemblPlants:KRH57579
ProteinID:KRH57579	ProteinID:KRH57579.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00023C44C8	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:7347545..7354517

Molecular Weight (calculated)

63975.9 Da

IEP (calculated)

6.763

GRAVY (calculated)

-0.574

Length

571 amino acids

Sequence
(BLAST)

001: MVFSANDLQE WKDFPKGLKV LLLERDNISA AEIRAKLEAM DYNVSTFCEE NEALSAISSG LESFHIAIVE VSSSSGQGGF KFLENAKDLP TIMTSNNHCL
101: NTMMKCIALG AVEFLRKPLS EDKLRNIWQH VVHKAFNARA SILSESLKPV KESVVSMLQL QTDDEQHESR VSRDIEKVSR FVDNDHELSS GNDKYPAPST
201: PQLRQGTRLL DDGDCQEQTN CSTGKESGEH EGESKSVETT CGNLNAESTP QQRKSEITLV REEVESTPQQ RKSEITLVKE EVDIVDASKG ESVASPHTQK
301: RKVLSNTDRN TKALIKVGVH SDSCEIRGNQ KKIKVDWTPE LHKTFVKAVE QLGIDQAIPS RILELMKVEG LTRHNVASHL QKYRMHKRQI LPKEERKWLN
401: LRERSYCVKR PIMAFPPYHS NHTLPLPPVY PMWGQSGSPT AGMQIWGSPG YPFWHTTAEN WHWKPFPGMH ADAWGCPVLP LPPPQTPGFP YSQNMPSLLN
501: ADAVDHTFTM PQSSFEHYPA EEVVDKVVKE AISKPWLPLP LGLKPPSPDS VLAELSRQGI SNIPPKGSNS C

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.