Factsheet for Bra013279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013277.1-P	Field mustard	nucleus	89.3	53.08
Bra013278.1-P	Field mustard	nucleus	89.3	53.08
CDY44493	Canola	nucleus	80.27	48.39
Bra012623.1-P	Field mustard	nucleus	70.9	41.33
AT4G18020.1	Thale cress	nucleus	69.23	38.69
Bra033726.1-P	Field mustard	nucleus	32.11	25.6
VIT_02s0012g00570.t01	Wine grape	nucleus	46.15	24.73
Bra036015.1-P	Field mustard	nucleus	30.1	24.32
GSMUA_Achr11P...	Banana	nucleus	39.13	24.27
PGSC0003DMT400068374	Potato	nucleus	44.82	24.19
Solyc06g061030.2.1	Tomato	nucleus	44.15	23.61
KRH04301	Soybean	nucleus	45.48	23.61
Bra036482.1-P	Field mustard	nucleus	34.11	23.5
KRH77235	Soybean	nucleus	43.81	23.48
KRH57579	Soybean	nucleus	44.48	23.29
Solyc08g077230.2.1	Tomato	nucleus	42.81	22.86
Bra031129.1-P	Field mustard	nucleus	31.77	22.84
KRH28259	Soybean	nucleus	43.48	22.81
PGSC0003DMT400062232	Potato	nucleus	42.14	22.5
GSMUA_Achr2P18200_001	Banana	nucleus	39.46	21.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra013279	EnsemblPlants:Bra013279.1	EnsemblPlants:Bra013279.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4D9W9	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002545EB0	SEG:seg	:	:

Description

AT4G18020 (E=7e-082) APRR2, PRR2 | APRR2; transcription factor/ two-component response regulator

Coordinates

chrA01:-:4696156..4697508

Molecular Weight (calculated)

33566.7 Da

IEP (calculated)

9.760

GRAVY (calculated)

-0.819

Length

299 amino acids

Sequence
(BLAST)

001: MEDQDIGESK SVDTTNHDDN VIVKEEKLDG ETGDTKSEKT DSVKFQKKED ETTKHNNKST GIKNLSGNKP SRKKVDWTQE LHKKFVQAVD QLGVDQAIPS
101: RILELMKVDG LTRHNVASHL QKFRMHRRNI LPKEDHNHRY IQSRENHRQI QRQYNGFQQQ HRPVMAYPVW GLPGVHPPGA VPPLWPPPLQ SSGQLPPWHW
201: RPPYPTVNVN AWGCPIVPPV TGPFSSPTVT GTFSTPPATQ LDEEMVDQVV KEAISKPWLP LPLGLKPPSA ESVLAELSRQ GISAVPSSSS SINGSRRLR

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.