CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57579	Soybean	nucleus	87.85	88.62
KRH77235	Soybean	nucleus	70.14	72.4
KRH28259	Soybean	nucleus	69.97	70.7
VIT_02s0012g00570.t01	Wine grape	nucleus	61.46	63.44
PGSC0003DMT400068374	Potato	nucleus	51.74	53.79
CDY44493	Canola	nucleus	46.18	53.63
Bra013277.1-P	Field mustard	nucleus	46.53	53.28
Bra013278.1-P	Field mustard	nucleus	46.53	53.28
CDX78822	Canola	nucleus	46.18	52.78
Solyc06g061030.2.1	Tomato	nucleus	51.22	52.77
Solyc08g077230.2.1	Tomato	nucleus	50.52	51.96
PGSC0003DMT400062232	Potato	nucleus	50.52	51.96
AT4G18020.1	Thale cress	nucleus	46.01	49.53
Bra012623.1-P	Field mustard	nucleus	43.06	48.34
CDY01512	Canola	nucleus	43.4	48.17
CDX90427	Canola	nucleus	43.4	48.08
GSMUA_Achr11P...	Banana	nucleus	38.72	46.27
Bra013279.1-P	Field mustard	nucleus	23.61	45.48
GSMUA_Achr2P18200_001	Banana	nucleus	41.49	43.14
KRH55898	Soybean	nucleus	19.44	26.29
KRH25644	Soybean	nucleus	19.1	25.7
KRH26988	Soybean	nucleus	19.44	25.4
KRH22338	Soybean	nucleus	18.75	24.77

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100777535	MapMan:15.5.2.3	Gene3D:3.40.50.2300	EMBL:ACUP02010396	InterPro:CheY-like_superfamily
EnsemblPlantsGene:GLYMA_17G152800	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1MVC2	InterPro:IPR001789	InterPro:IPR017930	EnsemblPlants:KRH04301
ProteinID:KRH04301	ProteinID:KRH04301.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000233F3A5	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:12773838..12780785

Molecular Weight (calculated)

64283.4 Da

IEP (calculated)

6.762

GRAVY (calculated)

-0.541

Length

576 amino acids

Sequence
(BLAST)

001: MLISGIDRSV TFCGRLRNDA KPAMVFTAND LQEWKDFPKG LKVLLHERDN ISAAEIRAKL EAMDYNVSTF CDENDALSVI SSGLESFHIA IVEVSSSSAQ
101: GGFKFLENAK DLPTIMTSNN HCLNTMMKCI ALGAVEFLSK PLSEDKLRNI WQHVVHKAFN AGANILSESL KPVKESVASM LQLQTDNEQH ESRVSIDIEK
201: VSSFVDNDHE LSPGNDKYPA PSTPQLMQGT RLLDDGDCQE QANCSTEKES GEHDGESKSV ETTCGNLNAE ITPQQRKSEI TLVREEVDIV DASMGESVAS
301: PHTQKRKVLS NTDRNTKASN KVGVHSDSCE IRGKRKKIKV DWTPELHKKF VKAVEQLGID QAIPSRILEL MKVESLTRHN VASHLQKYRM HKRQILPKEE
401: ERKWSNQRER SYSVQRPIMA FPPYHSNHTH PLPPVYPMWG QSGGPMAGMQ IWGSPGYPLW QPTAENWRWK PFPGMHADAW GCPVLPIPPQ APGFPYSQNM
501: PALLNADAAD HTFTMPQSSF EHYLAEEVVD KVVKEAINKP WLPLPLGLKP PSTESVLAEL SRQGISNIPP KGSKSC

Best Arabidopsis Sequence Match ( AT4G18020.9 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.