Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90427 | Canola | nucleus | 93.64 | 93.46 |
| CDY44493 | Canola | nucleus | 74.57 | 78.02 |
| CDX78822 | Canola | nucleus | 73.99 | 76.19 |
| AT4G18020.1 | Thale cress | nucleus | 69.75 | 67.66 |
| VIT_02s0012g00570.t01 | Wine grape | nucleus | 51.45 | 47.85 |
| KRH77235 | Soybean | nucleus | 47.4 | 44.09 |
| KRH57579 | Soybean | nucleus | 47.98 | 43.61 |
| KRH04301 | Soybean | nucleus | 48.17 | 43.4 |
| KRH28259 | Soybean | nucleus | 47.59 | 43.33 |
| PGSC0003DMT400068374 | Potato | nucleus | 45.66 | 42.78 |
| Solyc06g061030.2.1 | Tomato | nucleus | 45.86 | 42.58 |
| PGSC0003DMT400062232 | Potato | nucleus | 45.47 | 42.14 |
| GSMUA_Achr11P... | Banana | nucleus | 38.73 | 41.7 |
| Solyc08g077230.2.1 | Tomato | nucleus | 43.74 | 40.54 |
| GSMUA_Achr2P18200_001 | Banana | nucleus | 41.43 | 38.81 |
| CDY22303 | Canola | nucleus | 20.42 | 28.27 |
| CDX94762 | Canola | nucleus | 20.23 | 28.0 |
| CDY14913 | Canola | nucleus | 19.85 | 27.18 |
| CDX96952 | Canola | nucleus | 18.5 | 26.16 |
| CDY05773 | Canola | nucleus | 21.39 | 24.89 |
| CDY31954 | Canola | nucleus | 21.39 | 24.67 |
| CDX81968 | Canola | nucleus | 18.5 | 9.4 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | Gene3D:3.40.50.2300 | GO:A0A078EK54 | EnsemblPlants:CDY01512 | ProteinID:CDY01512 |
| ProteinID:CDY01512.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00112533001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR31312 | PANTHER:PTHR31312:SF2 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE395E | SEG:seg |
Description
BnaC07g35020D
Coordinates
chrLK031927:-:278864..282220
Molecular Weight (calculated)
57740.1 Da
IEP (calculated)
6.175
GRAVY (calculated)
-0.647
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MVCTANDLSK WENFPKGLRV LLLDGGRDGI SAAETRSKLD SMDYIVTTFY DESEALSAVV KSPESFHIAI VEVNTSAEDE SFKYLEAAKG LLPTIMISDD
101: HCIATTMKCI ALGAVVFLQK PLSPEKLKNI WQHVVHKAFN DGGASVSESL KPIKDSVVSM LNVDTNMTID DKDPAPSTPQ LRQVSRLLDQ ENRNCSVENV
201: NSPTEKENTE DHDIGESKSV DTTNHEDNVI VKEEKGDGEK EAEQGQTEEQ KQEEGETGDS VNFHKKEDET NKPINKSSGN KNLSSNKASR KKVDWTQELH
301: KKFVQAVEQL GVDQAIPSRI LELMKVDGLT RHNVASHLQK FRMHRRNILP KDDHNHRWIQ SRDNHRQIQR QYNGFQQQHR PVMAYPVWGL PGVHPPGAVP
401: PLWPPALPSA GQLPPWHFKP PYPTLNGNTW GYPVGPPVTG TFFSPPITGT FSTPPANQLD EEMIDQLVKE VISKPGMPLP LGLKPPSAES VLTELLRQDI
501: SAVPSSSSSC QINGSRRLR
101: HCIATTMKCI ALGAVVFLQK PLSPEKLKNI WQHVVHKAFN DGGASVSESL KPIKDSVVSM LNVDTNMTID DKDPAPSTPQ LRQVSRLLDQ ENRNCSVENV
201: NSPTEKENTE DHDIGESKSV DTTNHEDNVI VKEEKGDGEK EAEQGQTEEQ KQEEGETGDS VNFHKKEDET NKPINKSSGN KNLSSNKASR KKVDWTQELH
301: KKFVQAVEQL GVDQAIPSRI LELMKVDGLT RHNVASHLQK FRMHRRNILP KDDHNHRWIQ SRDNHRQIQR QYNGFQQQHR PVMAYPVWGL PGVHPPGAVP
401: PLWPPALPSA GQLPPWHFKP PYPTLNGNTW GYPVGPPVTG TFFSPPITGT FSTPPANQLD EEMIDQLVKE VISKPGMPLP LGLKPPSAES VLTELLRQDI
501: SAVPSSSSSC QINGSRRLR
001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG
501: LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR
Arabidopsis Description
APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.