Factsheet for GSMUA_Achr11P17740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18200_001	Banana	nucleus	59.13	51.44
VIT_02s0012g00570.t01	Wine grape	nucleus	49.79	43.01
CDY44493	Canola	nucleus	42.32	41.13
CDX78822	Canola	nucleus	42.12	40.28
Bra013278.1-P	Field mustard	nucleus	41.91	40.16
Bra013277.1-P	Field mustard	nucleus	41.91	40.16
KRH57579	Soybean	nucleus	47.1	39.75
Solyc08g077230.2.1	Tomato	nucleus	46.06	39.64
PGSC0003DMT400062232	Potato	nucleus	46.06	39.64
Bra013279.1-P	Field mustard	nucleus	24.27	39.13
CDY01512	Canola	nucleus	41.7	38.73
KRH04301	Soybean	nucleus	46.27	38.72
KRH77235	Soybean	nucleus	44.81	38.71
AT4G18020.1	Thale cress	nucleus	42.74	38.5
Bra012623.1-P	Field mustard	nucleus	40.66	38.21
CDX90427	Canola	nucleus	41.08	38.08
KRH28259	Soybean	nucleus	44.81	37.89
PGSC0003DMT400068374	Potato	nucleus	43.36	37.73
Solyc06g061030.2.1	Tomato	nucleus	42.53	36.67
GSMUA_Achr2P15250_001	Banana	nucleus	23.03	26.18
GSMUA_Achr10P...	Banana	nucleus	23.24	26.17
GSMUA_Achr7P11040_001	Banana	nucleus	22.82	25.82
GSMUA_Achr6P05850_001	Banana	nucleus	23.24	25.45

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G17740_001	EnsemblPlants:GSMUA_Achr11P17740_001
EnsemblPlants:GSMUA_Achr11T17740_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M0RT54	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR31312
PANTHER:PTHR31312:SF2	InterPro:SANT/Myb	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557
UniParc:UPI000294ABBE	:	:	:	:	:

Description

Putative Two-component response regulator-like APRR2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17740_001]

Coordinates

chr11:+:19318404..19321727

Molecular Weight (calculated)

55007.0 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.538

Length

482 amino acids

Sequence
(BLAST)

001: MVGATDDFVV WKDFPKRLKI LLLQKDEASA AETKSKLEEM DYLVSLYHSE EDALEAISKD AESFHVSIVE VTASDSCGTF RFLEMAQDIP TIVISDEHCL
101: STMMKCIALG AAEFLQKPLS EDKLRNIWQH VVHKALNAGG SVLSKSLKPI KDTVVSMLRI QSETSEHKIE EKVTEIDGKH GCEKTMANDR LSAPSTPQLE
201: RGRFPPDREF QDKKKSVLDY SYLNGGRNNR KKTKVDWTPE LHRRFVQAVE QLGIEQAIPS KILELMKVEG LTRHNVASHL QKYRMHRRHI LPKDQDRRWQ
301: PHRDSTARGC ISRPILAYPP YHPNCGAPTN QIYPVWGHPN YRSHGVQMWG HAGYTAWHPP PQSWPWKTYP LVRADAWGCP VVTQYGQYRM SSPHTTDRFE
401: FHRLLCIHRH IRGMEIKSVL KWQVEMIDQL VKETMSKPWL PLPLGLKSPS TDVVLAELNR QGICTVPPAT NAASPDPNDF CG

Best Arabidopsis Sequence Match ( AT4G18020.7 )
(BLAST)

001: MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM
101: ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI
201: NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD
301: WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY
401: PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT PSNTTAGGFQ YPNGAETGFK IMPASQPVSV NNSLFSF

Arabidopsis Description

APRR2Two-component response regulator-like APRR2 [Source:UniProtKB/Swiss-Prot;Acc:Q6LA43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.