Factsheet for Bra031129.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G20570.2	Thale cress	nucleus	69.71	66.51
Bra036482.1-P	Field mustard	nucleus	68.51	65.67
PGSC0003DMT400056255	Potato	nucleus	35.82	47.0
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	21.15	45.83
VIT_12s0028g03100.t01	Wine grape	nucleus	44.71	44.82
KRH55898	Soybean	nucleus	44.47	43.43
Bra036015.1-P	Field mustard	nucleus	38.46	43.24
PGSC0003DMT400024265	Potato	nucleus	46.63	43.02
KRH25644	Soybean	nucleus	44.23	42.99
GSMUA_Achr7P11040_001	Banana	nucleus	43.99	42.96
KRH22338	Soybean	nucleus	44.47	42.43
Bra033726.1-P	Field mustard	nucleus	37.74	41.87
GSMUA_Achr10P...	Banana	nucleus	43.03	41.82
KRH26988	Soybean	nucleus	43.51	41.04
GSMUA_Achr2P15250_001	Banana	nucleus	40.87	40.09
CDX81968	Canola	nucleus	94.95	38.69
Os06t0348800-01	Rice	mitochondrion, plastid	41.83	38.24
TraesCS7D01G347500.1	Wheat	nucleus	40.14	36.46
HORVU0Hr1G007770.1	Barley	nucleus	39.9	36.17
HORVU7Hr1G083690.1	Barley	nucleus	39.9	36.17
HORVU0Hr1G010940.1	Barley	nucleus	39.9	36.17
TraesCS7A01G339800.1	Wheat	nucleus	39.9	36.01
Zm00001d039260_P002	Maize	nucleus	39.42	35.57
TraesCS7B01G251400.1	Wheat	nucleus	39.18	35.51
EER88132	Sorghum	nucleus	39.66	35.41
TraesCS3D01G168200.2	Wheat	nucleus	42.07	34.79
GSMUA_Achr6P05850_001	Banana	nucleus	36.78	34.77
Zm00001d044785_P001	Maize	nucleus	39.42	34.45
TraesCS3B01G191600.1	Wheat	nucleus	41.59	34.39
TraesCS3A01G161000.1	Wheat	nucleus	42.07	34.38
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	44.71	34.25
HORVU3Hr1G032440.2	Barley	nucleus	41.59	34.19
EES02166	Sorghum	nucleus	40.14	33.6
Os01t0239000-02	Rice	nucleus	42.79	33.02
Bra013279.1-P	Field mustard	nucleus	22.84	31.77
HORVU3Hr1G032410.2	Barley	nucleus	9.62	19.14
Bra012623.1-P	Field mustard	nucleus	23.56	19.1
Bra013278.1-P	Field mustard	nucleus	23.08	19.09
Bra013277.1-P	Field mustard	nucleus	23.08	19.09

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra031129	EnsemblPlants:Bra031129.1	EnsemblPlants:Bra031129.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EQQ6	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002542956	SEG:seg	:	:

Description

AT2G20570 (E=1e-140) GPRI1, GLK1 | GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1); transcription factor/ transcription regulator

Coordinates

chrA09:-:32354974..32358922

Molecular Weight (calculated)

45534.6 Da

IEP (calculated)

7.261

GRAVY (calculated)

-0.509

Length

416 amino acids

Sequence
(BLAST)

001: MLALSPARNS ARGGCFDGES EFLATSCDFT INPEENFPVF ADHGDLLDII DFDDLFGVAG DVLPDLEIDP EILAGDFSAS SSSEKTDSQG ETNKKGISGE
101: VVSKRDEDER AMSEKMVNYV DGDSNRKRKY SSSSGSSKNN SNEGKRKVKK VDWTPELHRR FVDAVEQLGL EKAVPSRILE LMGVHCLTRH NVASHLQKYR
201: SHRKHLLARE AEAANWTRKR HIYGLDSTGV NINGRNKNGW IAPAPTIGYA PPPPAAVASP AIHHHHFRPL HVWGHPTVNQ SVIPHVFPKH LPPPSSAMAT
301: PPFWVSDTPY WPRVQNGPAP YFPTVATRFR APPVAGFPQA MPPHHTVSKP DHGYGGSRSL VDLHPSKESV DAAIGDVLTR PWLPLPLGLK PPAVDGVMTE
401: LHRHGVSEVP PTAPCA

Best Arabidopsis Sequence Match ( AT2G20570.1 )
(BLAST)

001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA

Arabidopsis Description

GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.