Factsheet for Zm00001d044785_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88132	Sorghum	nucleus	63.87	65.24
Os06t0348800-01	Rice	mitochondrion, plastid	62.18	65.05
HORVU7Hr1G083690.1	Barley	nucleus	58.82	61.0
HORVU0Hr1G010940.1	Barley	nucleus	58.82	61.0
HORVU0Hr1G007770.1	Barley	nucleus	58.82	61.0
TraesCS7D01G347500.1	Wheat	nucleus	57.35	59.61
TraesCS7A01G339800.1	Wheat	nucleus	56.72	58.57
TraesCS7B01G251400.1	Wheat	nucleus	56.3	58.39
GSMUA_Achr7P11040_001	Banana	nucleus	46.85	52.35
GSMUA_Achr10P...	Banana	nucleus	46.64	51.87
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	20.59	51.04
GSMUA_Achr2P15250_001	Banana	nucleus	44.96	50.47
PGSC0003DMT400056255	Potato	nucleus	32.14	48.27
VIT_12s0028g03100.t01	Wine grape	nucleus	39.29	45.06
GSMUA_Achr6P05850_001	Banana	nucleus	40.13	43.41
KRH26988	Soybean	nucleus	40.13	43.31
KRH22338	Soybean	nucleus	39.5	43.12
PGSC0003DMT400024265	Potato	nucleus	39.92	42.13
KRH25644	Soybean	nucleus	37.82	42.06
KRH55898	Soybean	nucleus	36.34	40.61
Zm00001d039260_P002	Maize	nucleus	39.08	40.35
Bra036015.1-P	Field mustard	nucleus	31.09	40.0
AT5G44190.1	Thale cress	nucleus	32.14	39.64
CDY14913	Canola	nucleus	31.51	39.58
Bra031129.1-P	Field mustard	nucleus	34.45	39.42
AT2G20570.2	Thale cress	nucleus	35.92	39.22
CDX96952	Canola	nucleus	29.83	38.69
Bra036482.1-P	Field mustard	nucleus	34.24	37.56
CDY22303	Canola	nucleus	29.41	37.33
CDX94762	Canola	nucleus	29.41	37.33
Bra033726.1-P	Field mustard	nucleus	28.99	36.8
CDY05773	Canola	nucleus	34.03	36.32
CDY31954	Canola	nucleus	33.61	35.56
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	39.08	34.25
CDX81968	Canola	nucleus	34.24	15.96

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EntrezGene:541882	ProteinID:AQL00887.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010638	GO:GO:0016043	GO:GO:0045893	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K7W4V3	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312
PANTHER:PTHR31312:SF3	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000222064B	EnsemblPlantsGene:Zm00001d044785
EnsemblPlants:Zm00001d044785_P001	EnsemblPlants:Zm00001d044785_T001	SEG:seg	:	:	:

Description

G2-like1 G2-like1

Coordinates

chr9:-:2407990..2410336

Molecular Weight (calculated)

50526.4 Da

IEP (calculated)

5.092

GRAVY (calculated)

-0.368

Length

476 amino acids

Sequence
(BLAST)

001: MLAVSPSPVR CADAEECGGG GASKEMEETA VGPVSDSDLD FDFTVDDIDF GDFFLRLDDG DDALPGLEVD PAEIVFADFE AIATAGGDGG VTDQEVPSVL
101: PFADAAHIGA VDPCCGVLGE DNDAACADVE EGKGECDHAD EVAAAGNNNS DSGEAGCGGA FAGEKSPSST ASSSQEAESR RKVSKKHSQG KKKAKVDWTP
201: ELHRRFVQAV EELGIDKAVP SRILEIMGID SLTRHNIASH LQKYRSHRKH MLAREVEAAT WTTHRRPMYA APSGAVKRPD SNAWTVPTIG FPPPAGTPPR
301: PVQHFGRPLH VWGHPSPTPA VESPRVPMWP RHLAPRAPPP PPWAPPPPAD PASFWHHAYM RQGPAAHMPD QVAVTPCVAV PMAAARFPAP HVRGSLPWPP
401: PMYRPLVPPA LAGKSQQDAL FQLQIQPSSE SIDAAIGDVL TKPWLPLPLG LKPPSVDSVM GELQRQGVAN VPQACG

Best Arabidopsis Sequence Match ( AT2G20570.1 )
(BLAST)

001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA

Arabidopsis Description

GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.