Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05773 | Canola | nucleus | 71.33 | 69.73 |
| Bra031129.1-P | Field mustard | nucleus | 66.51 | 69.71 |
| Bra036482.1-P | Field mustard | nucleus | 66.74 | 67.05 |
| CDY31954 | Canola | nucleus | 68.12 | 66.0 |
| PGSC0003DMT400056255 | Potato | nucleus | 35.32 | 48.58 |
| VIT_12s0028g03100.t01 | Wine grape | nucleus | 45.87 | 48.19 |
| Solyc10g008160.2.1 | Tomato | mitochondrion, nucleus | 20.64 | 46.88 |
| PGSC0003DMT400024265 | Potato | nucleus | 47.48 | 45.9 |
| KRH22338 | Soybean | nucleus | 44.95 | 44.95 |
| GSMUA_Achr7P11040_001 | Banana | nucleus | 43.58 | 44.6 |
| AT5G44190.1 | Thale cress | nucleus | 39.22 | 44.3 |
| KRH26988 | Soybean | nucleus | 44.5 | 43.99 |
| KRH55898 | Soybean | nucleus | 42.66 | 43.66 |
| KRH25644 | Soybean | nucleus | 42.2 | 42.99 |
| GSMUA_Achr10P... | Banana | nucleus | 41.74 | 42.52 |
| GSMUA_Achr2P15250_001 | Banana | nucleus | 40.6 | 41.75 |
| Os06t0348800-01 | Rice | mitochondrion, plastid | 41.05 | 39.34 |
| Solyc07g053630.2.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 46.56 | 37.38 |
| TraesCS7D01G347500.1 | Wheat | nucleus | 38.99 | 37.12 |
| GSMUA_Achr6P05850_001 | Banana | nucleus | 37.39 | 37.05 |
| EER88132 | Sorghum | nucleus | 39.22 | 36.7 |
| TraesCS7A01G339800.1 | Wheat | nucleus | 38.53 | 36.44 |
| HORVU7Hr1G083690.1 | Barley | nucleus | 38.07 | 36.17 |
| HORVU0Hr1G010940.1 | Barley | nucleus | 38.07 | 36.17 |
| HORVU0Hr1G007770.1 | Barley | nucleus | 38.07 | 36.17 |
| TraesCS7B01G251400.1 | Wheat | nucleus | 38.07 | 36.17 |
| Zm00001d039260_P002 | Maize | nucleus | 38.07 | 36.01 |
| Zm00001d044785_P001 | Maize | nucleus | 39.22 | 35.92 |
| TraesCS3D01G168200.2 | Wheat | nucleus | 40.83 | 35.39 |
| TraesCS3B01G191600.1 | Wheat | nucleus | 40.37 | 34.99 |
| HORVU3Hr1G032440.2 | Barley | nucleus | 40.6 | 34.98 |
| TraesCS3A01G161000.1 | Wheat | nucleus | 40.83 | 34.97 |
| EES02166 | Sorghum | nucleus | 39.45 | 34.61 |
| Os01t0239000-02 | Rice | nucleus | 42.66 | 34.51 |
| CDX81968 | Canola | nucleus | 65.83 | 28.11 |
| AT4G18020.1 | Thale cress | nucleus | 22.94 | 18.69 |
| HORVU3Hr1G032410.2 | Barley | nucleus | 8.94 | 18.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:816579 | ProteinID:AEC07031.1 | ArrayExpress:AT2G20570 | EnsemblPlantsGene:AT2G20570 |
| RefSeq:AT2G20570 | TAIR:AT2G20570 | RefSeq:AT2G20570-TAIR-G | EnsemblPlants:AT2G20570.2 | TAIR:AT2G20570.2 | Unigene:At.24134 |
| UniProt:F4IVF9 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009658 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:0010380 | GO:GO:0016043 | GO:GO:0044212 | GO:GO:0045893 | Symbol:GPRI1 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | RefSeq:NP_001189562.1 | PFAM:PF00249 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS51294 | PANTHER:PTHR31312 | PANTHER:PTHR31312:SF1 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0001E92D2F | SEG:seg | : | : | : |
Description
GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
Coordinates
chr2:+:8855358..8857756
Molecular Weight (calculated)
47947.4 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.501
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKTRLNE QVYNGFVFFL KVDWTPELHR RFVEAVEQLG VDKAVPSRIL
201: ELMGVHCLTR HNVASHLQKY RSHRKHLLAR EAEAANWTRK RHIYGVDTGA NLNGRTKNGW LAPAPTLGFP PPPPVAVAPP PVHHHHFRPL HVWGHPTVDQ
301: SIMPHVWPKH LPPPSTAMPN PPFWVSDSPY WHPMHNGTTP YLPTVATRFR APPVAGIPHA LPPHHTMYKP NLGFGGARPP VDLHPSKESV DAAIGDVLTR
401: PWLPLPLGLN PPAVDGVMTE LHRHGVSEVP PTASCA
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKTRLNE QVYNGFVFFL KVDWTPELHR RFVEAVEQLG VDKAVPSRIL
201: ELMGVHCLTR HNVASHLQKY RSHRKHLLAR EAEAANWTRK RHIYGVDTGA NLNGRTKNGW LAPAPTLGFP PPPPVAVAPP PVHHHHFRPL HVWGHPTVDQ
301: SIMPHVWPKH LPPPSTAMPN PPFWVSDSPY WHPMHNGTTP YLPTVATRFR APPVAGIPHA LPPHHTMYKP NLGFGGARPP VDLHPSKESV DAAIGDVLTR
401: PWLPLPLGLN PPAVDGVMTE LHRHGVSEVP PTASCA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.