Factsheet for TraesCS7D01G347500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G339800.1	Wheat	nucleus	90.39	89.8
TraesCS7B01G251400.1	Wheat	nucleus	88.86	88.67
HORVU7Hr1G083690.1	Barley	nucleus	86.03	85.84
HORVU0Hr1G010940.1	Barley	nucleus	86.03	85.84
HORVU0Hr1G007770.1	Barley	nucleus	86.03	85.84
Os06t0348800-01	Rice	mitochondrion, plastid	67.47	67.91
Zm00001d044785_P001	Maize	nucleus	59.61	57.35
EER88132	Sorghum	nucleus	57.21	56.22
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	21.18	50.52
GSMUA_Achr10P...	Banana	nucleus	46.72	50.0
GSMUA_Achr7P11040_001	Banana	nucleus	45.41	48.83
GSMUA_Achr2P15250_001	Banana	nucleus	44.54	48.11
PGSC0003DMT400056255	Potato	nucleus	32.75	47.32
KRH22338	Soybean	nucleus	42.58	44.72
VIT_12s0028g03100.t01	Wine grape	nucleus	40.39	44.58
KRH26988	Soybean	nucleus	42.36	43.99
PGSC0003DMT400024265	Potato	nucleus	42.79	43.46
KRH55898	Soybean	nucleus	40.39	43.43
KRH25644	Soybean	nucleus	39.74	42.52
GSMUA_Achr6P05850_001	Banana	nucleus	40.17	41.82
CDY14913	Canola	nucleus	34.28	41.42
Bra036015.1-P	Field mustard	nucleus	32.53	40.27
Bra031129.1-P	Field mustard	nucleus	36.46	40.14
AT5G44190.1	Thale cress	nucleus	33.41	39.64
CDX96952	Canola	nucleus	31.66	39.51
AT2G20570.2	Thale cress	nucleus	37.12	38.99
TraesCS3D01G168200.2	Wheat	nucleus	41.48	37.77
Bra036482.1-P	Field mustard	nucleus	35.37	37.33
CDY05773	Canola	nucleus	36.24	37.22
CDX94762	Canola	nucleus	29.91	36.53
CDY22303	Canola	nucleus	29.91	36.53
Bra033726.1-P	Field mustard	nucleus	29.48	36.0
CDY31954	Canola	nucleus	35.37	36.0
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	42.36	35.73
CDX81968	Canola	nucleus	36.24	16.26

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010638
GO:GO:0016043	GO:GO:0045893	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF3	InterPro:SANT/Myb	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7D01G347500	EnsemblPlants:TraesCS7D01G347500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:446987938..446990692

Molecular Weight (calculated)

48958.1 Da

IEP (calculated)

5.694

GRAVY (calculated)

-0.369

Length

458 amino acids

Sequence
(BLAST)

001: MLAVSSARCL AAADEQRAEA APMETVGGAA VVADLDIDFD FTVDDIDFGD FFLRLEDGDA LPDLEVDPAD IFTDLEAAAA GVEEFQDQQV PCAELLAAVE
101: DVGSVSPASG VIGVDNTAVG LGDEKRGCNQ AEVGENMGGG DRPIVPDAKS PSSTTSSSTE AESRHKSSSK NSHGKKKAKV DWTPELHRRF VQAVEQLGID
201: KAVPSRILEI MGINSLTRHN IASHLQKYRS HRKHMIAREA EAASWTQRRQ MYAAGGPAAA VKRQDSNMWT VPTIGFAPAH PPPPPPPPSP AAMQHYARPL
301: HVWGHPTMDS PRMPMWPRHT ISRAPMPAWA PPPPPPSDPA FWHHPYMRGP AAYMPTHGTP CMAMPMTPKF PAPPVPVAMP CPVYAPPSPA PALASKNQQD
401: SQLQLQAQPS NESIDAAIGD VLSKPWLPLP LGLKPPSLGS VMGELERQGV ANVPQACG

Best Arabidopsis Sequence Match ( AT5G44190.1 )
(BLAST)

001: MLTVSPAPVL IGNNSKDTYM AADFADFTTE DLPDFTTVGD FSDDLLDGID YYDDLFIGFD GDDVLPDLEI DSEILGEYSG SGRDEEQEME GNTSTASETS
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP

Arabidopsis Description

GLK2Transcription activator GLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.