Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14913 | Canola | nucleus | 69.43 | 70.71 |
| CDY22303 | Canola | nucleus | 68.13 | 70.13 |
| CDX96952 | Canola | nucleus | 66.32 | 69.75 |
| Bra033726.1-P | Field mustard | nucleus | 67.62 | 69.6 |
| CDX94762 | Canola | nucleus | 66.84 | 68.8 |
| Bra036015.1-P | Field mustard | nucleus | 64.51 | 67.3 |
| Solyc10g008160.2.1 | Tomato | mitochondrion, nucleus | 22.54 | 45.31 |
| PGSC0003DMT400056255 | Potato | nucleus | 35.23 | 42.9 |
| KRH55898 | Soybean | nucleus | 46.63 | 42.25 |
| KRH22338 | Soybean | nucleus | 46.37 | 41.05 |
| VIT_12s0028g03100.t01 | Wine grape | nucleus | 44.04 | 40.96 |
| KRH25644 | Soybean | nucleus | 45.34 | 40.89 |
| KRH26988 | Soybean | nucleus | 45.85 | 40.14 |
| AT2G20570.2 | Thale cress | nucleus | 44.3 | 39.22 |
| GSMUA_Achr7P11040_001 | Banana | nucleus | 43.26 | 39.2 |
| PGSC0003DMT400024265 | Potato | nucleus | 45.34 | 38.8 |
| GSMUA_Achr2P15250_001 | Banana | nucleus | 41.97 | 38.21 |
| GSMUA_Achr10P... | Banana | nucleus | 40.67 | 36.68 |
| GSMUA_Achr6P05850_001 | Banana | nucleus | 39.9 | 35.0 |
| Os06t0348800-01 | Rice | mitochondrion, plastid | 41.19 | 34.95 |
| EER88132 | Sorghum | nucleus | 40.41 | 33.48 |
| TraesCS7D01G347500.1 | Wheat | nucleus | 39.64 | 33.41 |
| HORVU0Hr1G007770.1 | Barley | nucleus | 39.64 | 33.33 |
| HORVU0Hr1G010940.1 | Barley | nucleus | 39.64 | 33.33 |
| TraesCS7B01G251400.1 | Wheat | nucleus | 39.64 | 33.33 |
| HORVU7Hr1G083690.1 | Barley | nucleus | 39.64 | 33.33 |
| TraesCS7A01G339800.1 | Wheat | nucleus | 39.64 | 33.19 |
| Solyc07g053630.2.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 45.6 | 32.41 |
| Zm00001d044785_P001 | Maize | nucleus | 39.64 | 32.14 |
| Zm00001d039260_P002 | Maize | nucleus | 38.34 | 32.1 |
| EES02166 | Sorghum | nucleus | 40.16 | 31.19 |
| TraesCS3D01G168200.2 | Wheat | nucleus | 39.12 | 30.02 |
| TraesCS3A01G161000.1 | Wheat | nucleus | 39.38 | 29.86 |
| HORVU3Hr1G032440.2 | Barley | nucleus | 39.12 | 29.84 |
| TraesCS3B01G191600.1 | Wheat | nucleus | 38.86 | 29.82 |
| Os01t0239000-02 | Rice | nucleus | 40.41 | 28.94 |
| HORVU3Hr1G032410.2 | Barley | nucleus | 11.4 | 21.05 |
| AT4G18020.1 | Thale cress | nucleus | 27.2 | 19.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EntrezGene:834442 | ProteinID:AAK20121.1 | EMBL:AB062490 | ProteinID:AED95072.1 |
| ArrayExpress:AT5G44190 | EnsemblPlantsGene:AT5G44190 | RefSeq:AT5G44190 | TAIR:AT5G44190 | RefSeq:AT5G44190-TAIR-G | EnsemblPlants:AT5G44190.1 |
| TAIR:AT5G44190.1 | EMBL:AY026773 | EMBL:AY050386 | EMBL:AY124819 | ProteinID:BAB10986.1 | Symbol:GLK2 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009658 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:0010380 |
| GO:GO:0016043 | GO:GO:0045893 | GO:GO:1900056 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | RefSeq:NP_199232.1 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR31312 |
| PANTHER:PTHR31312:SF1 | UniProt:Q9FFH0 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI00000A3CE7 |
| SEG:seg | : | : | : | : | : |
Description
GLK2Transcription activator GLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH0]
Coordinates
chr5:+:17798281..17800926
Molecular Weight (calculated)
42169.6 Da
IEP (calculated)
6.605
GRAVY (calculated)
-0.623
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTVSPAPVL IGNNSKDTYM AADFADFTTE DLPDFTTVGD FSDDLLDGID YYDDLFIGFD GDDVLPDLEI DSEILGEYSG SGRDEEQEME GNTSTASETS
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.