Factsheet for Os01t0239000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G168200.2	Wheat	nucleus	55.29	59.24
HORVU3Hr1G032440.2	Barley	nucleus	54.73	58.3
TraesCS3B01G191600.1	Wheat	nucleus	54.17	58.05
TraesCS3A01G161000.1	Wheat	nucleus	54.73	57.96
EES02166	Sorghum	nucleus	50.28	54.53
GSMUA_Achr7P11040_001	Banana	nucleus	43.04	54.46
Zm00001d039260_P002	Maize	nucleus	45.27	52.93
GSMUA_Achr10P...	Banana	nucleus	41.74	52.57
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	18.0	50.52
VIT_12s0028g03100.t01	Wine grape	nucleus	38.03	49.4
GSMUA_Achr2P15250_001	Banana	nucleus	38.78	49.29
PGSC0003DMT400056255	Potato	nucleus	28.94	49.21
Os06t0348800-01	Rice	mitochondrion, plastid	41.37	49.01
KRH22338	Soybean	nucleus	38.78	47.94
KRH25644	Soybean	nucleus	36.92	46.5
KRH55898	Soybean	nucleus	36.18	45.77
KRH26988	Soybean	nucleus	36.92	45.12
PGSC0003DMT400024265	Potato	nucleus	37.11	44.35
GSMUA_Achr6P05850_001	Banana	nucleus	36.18	44.32
Bra036015.1-P	Field mustard	nucleus	29.5	42.97
Bra031129.1-P	Field mustard	nucleus	33.02	42.79
AT2G20570.2	Thale cress	nucleus	34.51	42.66
CDY14913	Canola	nucleus	29.5	41.95
CDY22303	Canola	nucleus	28.39	40.8
AT5G44190.1	Thale cress	nucleus	28.94	40.41
CDY05773	Canola	nucleus	33.4	40.36
Bra033726.1-P	Field mustard	nucleus	28.01	40.27
CDX94762	Canola	nucleus	27.83	40.0
Bra036482.1-P	Field mustard	nucleus	32.1	39.86
CDX96952	Canola	nucleus	26.72	39.24
CDY31954	Canola	nucleus	32.1	38.44
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	36.18	35.91
HORVU3Hr1G032410.2	Barley	nucleus	12.06	31.1
CDX81968	Canola	nucleus	32.65	17.24

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EntrezGene:4326363	EMBL:AK121019	ProteinID:BAD81484.1	ProteinID:BAD81485.1
ProteinID:BAF04456.1	ProteinID:BAS71255.1	ProteinID:BAS71256.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os01g0239000	EnsemblPlants:Os01t0239000-02
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF1	UniProt:Q5NAN5	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000049E79C	RefSeq:XP_015615905.1	SEG:seg	:

Description

GLK2Hypothetical conserved gene. (Os01t0239000-01);Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1). (Os01t0239000-02)

Coordinates

chr1:-:7686901..7693781

Molecular Weight (calculated)

56286.6 Da

IEP (calculated)

6.548

GRAVY (calculated)

-0.390

Length

539 amino acids

Sequence
(BLAST)

001: MLEVSTLRSP KADQRAGVGG HHVVGFVPAP PSPADVADEV DAFIVDDSCL LEYIDFSCCD VPFFHADDGD ILPDLEVDPT ELLAEFASSP DDEPPPTTSA
101: PGPGEPAAAA GAKEDVKEDG AAAAAAAAAA DYDGSPPPPR GKKKKDDEER SSSLPEEKDA KNGGGDEVLS AVTTEDSSAG AAKSCSPSAE GHSKRKPSSS
201: SSSAAAGKNS HGKRKVKVDW TPELHRRFVQ AVEQLGIDKA VPSRILELMG IECLTRHNIA SHLQKYRSHR KHLMAREAEA ASWTQKRQMY TAAAAAAAVA
301: AGGGPRKDAA AATAAVAPWV MPTIGFPPPH AAAMVPPPPH PPPFCRPPLH VWGHPTAGVE PTTAAAPPPP SPHAQPPLLP VWPRHLAPPP PPLPAAWAHG
401: HQPAPVDPAA YWQQQYNAAR KWGPQAVTPG TPCMPPPLPP AAMLQRFPVP PVPGMVPHPM YRPIPPPSPP QGNKLAALQL QLDAHPSKES IDAAIGDVLV
501: KPWLPLPLGL KPPSLDSVMS ELHKQGIPKV PPAASGAAG

Best Arabidopsis Sequence Match ( AT2G20570.1 )
(BLAST)

001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA

Arabidopsis Description

GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.