Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G161000.1 | Wheat | nucleus | 79.64 | 79.17 |
| TraesCS3B01G191600.1 | Wheat | nucleus | 78.26 | 78.73 |
| TraesCS3D01G168200.2 | Wheat | nucleus | 77.47 | 77.93 |
| Os01t0239000-02 | Rice | nucleus | 58.3 | 54.73 |
| EES02166 | Sorghum | nucleus | 50.0 | 50.91 |
| Zm00001d039260_P002 | Maize | nucleus | 46.05 | 50.54 |
| Solyc10g008160.2.1 | Tomato | mitochondrion, nucleus | 18.77 | 49.48 |
| GSMUA_Achr10P... | Banana | nucleus | 40.51 | 47.9 |
| GSMUA_Achr7P11040_001 | Banana | nucleus | 39.72 | 47.18 |
| PGSC0003DMT400056255 | Potato | nucleus | 29.25 | 46.69 |
| HORVU3Hr1G032410.2 | Barley | nucleus | 18.97 | 45.93 |
| GSMUA_Achr2P15250_001 | Banana | nucleus | 37.55 | 44.81 |
| VIT_12s0028g03100.t01 | Wine grape | nucleus | 36.56 | 44.58 |
| KRH25644 | Soybean | nucleus | 37.35 | 44.16 |
| GSMUA_Achr6P05850_001 | Banana | nucleus | 37.55 | 43.18 |
| Bra036015.1-P | Field mustard | nucleus | 31.23 | 42.7 |
| HORVU7Hr1G083690.1 | Barley | nucleus | 38.74 | 42.7 |
| HORVU0Hr1G007770.1 | Barley | nucleus | 38.74 | 42.7 |
| HORVU0Hr1G010940.1 | Barley | nucleus | 38.74 | 42.7 |
| KRH22338 | Soybean | nucleus | 36.76 | 42.66 |
| CDY14913 | Canola | nucleus | 31.23 | 41.69 |
| PGSC0003DMT400024265 | Potato | nucleus | 37.15 | 41.69 |
| Bra031129.1-P | Field mustard | nucleus | 34.19 | 41.59 |
| KRH55898 | Soybean | nucleus | 34.98 | 41.55 |
| KRH26988 | Soybean | nucleus | 35.97 | 41.27 |
| AT2G20570.2 | Thale cress | nucleus | 34.98 | 40.6 |
| CDY22303 | Canola | nucleus | 29.84 | 40.27 |
| CDX94762 | Canola | nucleus | 29.84 | 40.27 |
| Bra036482.1-P | Field mustard | nucleus | 34.19 | 39.86 |
| Bra033726.1-P | Field mustard | nucleus | 29.45 | 39.73 |
| CDY05773 | Canola | nucleus | 34.98 | 39.69 |
| AT5G44190.1 | Thale cress | nucleus | 29.84 | 39.12 |
| CDY31954 | Canola | nucleus | 34.39 | 38.67 |
| CDX96952 | Canola | nucleus | 27.67 | 38.15 |
| Solyc07g053630.2.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 36.36 | 33.89 |
| CDX81968 | Canola | nucleus | 33.6 | 16.65 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.3 | EMBL:AK353571 | EMBL:AK361533 | UniProt:F2CPL9 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU3Hr1G032440 | EnsemblPlants:HORVU3Hr1G032440.2 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31312 | PANTHER:PTHR31312:SF1 |
| InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000200441C | SEG:seg | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CPL9]
Coordinates
chrchr3H:-:166062751..166068871
Molecular Weight (calculated)
54880.9 Da
IEP (calculated)
6.135
GRAVY (calculated)
-0.561
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEVATLQSP SPAIFSLGDH HVDVGFPEAT VEDDDFLLDY IDFSACDMPF FHVDDGDDDI LPDLEVDPTE LLAEFADEPT TVLSPAPAPD GCETHHHHGD
101: DEKTTVETEP PAEMDMELPE GKGETKGLSS SSEEKDVKQQ HDNDKNKKKN NIVGDEVCSA VTTDDSSAAV GSENSKSSAS AEGHSKRTSA AAATKSSHGR
201: RKVKVDWTPE LHRRFVQAVE QLGLDKAVPS RILELMGNEY RLTRHNIASH LQKYRSHRKH LMAREAEAAS WTHKRQMYAA AGGPRKDAPA GGGPWVVPTV
301: GFPPPGTMPH PHAAMAHHPG QPPPFCRPLH VWGHPTGVDA PLPLPLSPPS TMLPVWPRHL APPPAWAHQP PVDPVYWHQQ YNAARKWGPQ AVTQCVPPPM
401: PPAAMMQRFA APPMPGMMPH PMYRPIPPPP SPVPQNNKVA GLQLQLDAHP SKESIDAAIG DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKVPPAATT
501: NCDGAA
101: DEKTTVETEP PAEMDMELPE GKGETKGLSS SSEEKDVKQQ HDNDKNKKKN NIVGDEVCSA VTTDDSSAAV GSENSKSSAS AEGHSKRTSA AAATKSSHGR
201: RKVKVDWTPE LHRRFVQAVE QLGLDKAVPS RILELMGNEY RLTRHNIASH LQKYRSHRKH LMAREAEAAS WTHKRQMYAA AGGPRKDAPA GGGPWVVPTV
301: GFPPPGTMPH PHAAMAHHPG QPPPFCRPLH VWGHPTGVDA PLPLPLSPPS TMLPVWPRHL APPPAWAHQP PVDPVYWHQQ YNAARKWGPQ AVTQCVPPPM
401: PPAAMMQRFA APPMPGMMPH PMYRPIPPPP SPVPQNNKVA GLQLQLDAHP SKESIDAAIG DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKVPPAATT
501: NCDGAA
001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA
Arabidopsis Description
GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.