Factsheet for Zm00001d039260_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02166	Sorghum	nucleus	63.77	59.15
TraesCS3B01G191600.1	Wheat	nucleus	50.76	46.52
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	19.31	46.35
TraesCS3D01G168200.2	Wheat	nucleus	50.54	46.32
HORVU3Hr1G032440.2	Barley	nucleus	50.54	46.05
TraesCS3A01G161000.1	Wheat	nucleus	50.54	45.78
GSMUA_Achr7P11040_001	Banana	nucleus	41.87	45.31
Os01t0239000-02	Rice	nucleus	52.93	45.27
PGSC0003DMT400056255	Potato	nucleus	31.02	45.11
GSMUA_Achr10P...	Banana	nucleus	41.65	44.86
GSMUA_Achr2P15250_001	Banana	nucleus	40.35	43.87
VIT_12s0028g03100.t01	Wine grape	nucleus	38.61	42.89
GSMUA_Achr6P05850_001	Banana	nucleus	39.91	41.82
Bra036015.1-P	Field mustard	nucleus	33.41	41.62
KRH25644	Soybean	nucleus	37.96	40.89
CDY14913	Canola	nucleus	33.41	40.63
KRH22338	Soybean	nucleus	38.39	40.6
KRH26988	Soybean	nucleus	38.83	40.59
PGSC0003DMT400024265	Potato	nucleus	39.48	40.35
KRH55898	Soybean	nucleus	36.66	39.67
Bra031129.1-P	Field mustard	nucleus	35.57	39.42
Zm00001d044785_P001	Maize	nucleus	40.35	39.08
AT5G44190.1	Thale cress	nucleus	32.1	38.34
CDY05773	Canola	nucleus	37.09	38.34
AT2G20570.2	Thale cress	nucleus	36.01	38.07
CDX96952	Canola	nucleus	29.93	37.6
CDY22303	Canola	nucleus	30.37	37.33
CDX94762	Canola	nucleus	30.37	37.33
Bra036482.1-P	Field mustard	nucleus	35.14	37.33
Bra033726.1-P	Field mustard	nucleus	29.93	36.8
CDY31954	Canola	nucleus	35.36	36.22
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	38.61	32.78
HORVU3Hr1G032410.2	Barley	nucleus	11.28	24.88
CDX81968	Canola	nucleus	35.14	15.87

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EntrezGene:542493	ProteinID:AAG32325.1	EMBL:AF318579	EMBL:BT062838
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	EMBL:KJ727689
InterPro:Myb_dom	InterPro:Myb_dom_plants	ProteinID:ONM28137.1	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312
PANTHER:PTHR31312:SF1	UniProt:Q9FUL9	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000009D3ED
EnsemblPlantsGene:Zm00001d039260	EnsemblPlants:Zm00001d039260_P002	EnsemblPlants:Zm00001d039260_T002	SEG:seg	:	:

Description

golden plant2 golden plant2

Coordinates

chr3:+:750372..754974

Molecular Weight (calculated)

49257.3 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.376

Length

461 amino acids

Sequence
(BLAST)

001: MLEVSTLRGP TSSGSKAEQH CGGGGGFVGD HHVVFPTSGD CFAMVDDNLL DYIDFSCDVP FFDADGDILP DLEVDTTELL AEFSSTPPAD DLLAVAVFGA
101: DDQPAAAVAQ EKPSSSLEQT CGDDKGVAVA AARRKLQTTT TTTTTEEEDS SPAGSGANKS SASAEGHSSK KKSAGKNSNG GKRKVKVDWT PELHRRFVQA
201: VEQLGIDKAV PSRILEIMGT DCLTRHNIAS HLQKYRSHRK HLMAREAEAA TWAQKRHMYA PPAPRTTTTT DAARPPWVVP TTIGFPPPRF CRPLHVWGHP
301: PPHAAAAEAA AATPMLPVWP RHLAPPRHLA PWAHPTPVDP AFWHQQYSAA RKWGPQAAAV TQGTPCVPLP RFPVPHPIYS RPAMVPPPPS TTKLAQLHLE
401: LQAHPSKESI DAAIGDVLVK PWLPLPLGLK PPSLDSVMSE LHKQGVPKIP PAAATTTGAT G

Best Arabidopsis Sequence Match ( AT2G20570.1 )
(BLAST)

001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA

Arabidopsis Description

GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.