Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G032440.2 | Barley | nucleus | 45.93 | 18.97 |
| TraesCS3A01G161000.1 | Wheat | nucleus | 41.63 | 17.09 |
| TraesCS3D01G168200.2 | Wheat | nucleus | 40.67 | 16.9 |
| TraesCS3B01G191600.1 | Wheat | nucleus | 40.67 | 16.9 |
| Os01t0239000-02 | Rice | nucleus | 31.1 | 12.06 |
| EES02166 | Sorghum | nucleus | 27.75 | 11.67 |
| AT5G44190.1 | Thale cress | nucleus | 21.05 | 11.4 |
| CDY14913 | Canola | nucleus | 20.57 | 11.35 |
| Zm00001d039260_P002 | Maize | nucleus | 24.88 | 11.28 |
| GSMUA_Achr10P... | Banana | nucleus | 22.49 | 10.98 |
| CDX94762 | Canola | nucleus | 19.62 | 10.93 |
| CDX96952 | Canola | nucleus | 19.14 | 10.9 |
| Bra036015.1-P | Field mustard | nucleus | 19.14 | 10.81 |
| KRH22338 | Soybean | nucleus | 22.49 | 10.78 |
| CDY22303 | Canola | nucleus | 19.14 | 10.67 |
| GSMUA_Achr7P11040_001 | Banana | nucleus | 21.53 | 10.56 |
| HORVU0Hr1G007770.1 | Barley | nucleus | 22.97 | 10.46 |
| HORVU0Hr1G010940.1 | Barley | nucleus | 22.97 | 10.46 |
| HORVU7Hr1G083690.1 | Barley | nucleus | 22.97 | 10.46 |
| GSMUA_Achr2P15250_001 | Banana | nucleus | 21.05 | 10.38 |
| Bra033726.1-P | Field mustard | nucleus | 18.18 | 10.13 |
| VIT_12s0028g03100.t01 | Wine grape | nucleus | 20.1 | 10.12 |
| KRH25644 | Soybean | nucleus | 20.1 | 9.81 |
| PGSC0003DMT400056255 | Potato | nucleus | 14.83 | 9.78 |
| KRH26988 | Soybean | nucleus | 20.57 | 9.75 |
| KRH55898 | Soybean | nucleus | 19.62 | 9.62 |
| Bra031129.1-P | Field mustard | nucleus | 19.14 | 9.62 |
| PGSC0003DMT400024265 | Potato | nucleus | 19.62 | 9.09 |
| AT2G20570.2 | Thale cress | nucleus | 18.66 | 8.94 |
| GSMUA_Achr6P05850_001 | Banana | nucleus | 18.18 | 8.64 |
| CDY05773 | Canola | nucleus | 18.18 | 8.52 |
| CDY31954 | Canola | nucleus | 18.18 | 8.44 |
| Bra036482.1-P | Field mustard | nucleus | 17.22 | 8.29 |
| Solyc07g053630.2.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 20.57 | 7.92 |
| Solyc10g008160.2.1 | Tomato | mitochondrion, nucleus | 5.26 | 5.73 |
| CDX81968 | Canola | nucleus | 19.62 | 4.02 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G032410.2 | EnsemblPlantsGene:HORVU3Hr1G032410 | PANTHER:PTHR31312 | PANTHER:PTHR31312:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr3H:+:166020793..166021707
Molecular Weight (calculated)
22446.4 Da
IEP (calculated)
4.227
GRAVY (calculated)
-0.766
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEVATLQSP SPAIFSLGDH HVDVGFPEAT VEDDDFLLDY IDFSACDMPF FHVDDGDDDI LPDLEVDPTE LLAEFADEPT TVLSPAPAPD GCETHHHHGD
101: DEKTTVETEP PAEMDMELPE GKGETKGLSS SSEEKDVKQQ HDNDKNKKKN NIVGDEVCSA VTTDDSSAAV GSENSKSSAS AEGHSKRTSA AAATKSSHGR
201: RKVKTKHCP
101: DEKTTVETEP PAEMDMELPE GKGETKGLSS SSEEKDVKQQ HDNDKNKKKN NIVGDEVCSA VTTDDSSAAV GSENSKSSAS AEGHSKRTSA AAATKSSHGR
201: RKVKTKHCP
001: MLTVSPAPVL IGNNSKDTYM AADFADFTTE DLPDFTTVGD FSDDLLDGID YYDDLFIGFD GDDVLPDLEI DSEILGEYSG SGRDEEQEME GNTSTASETS
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP
Arabidopsis Description
GLK2Transcription activator GLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.