Factsheet for HORVU0Hr1G010940.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G083690.1	Barley	nucleus	100.0	100.0
HORVU0Hr1G007770.1	Barley	nucleus	100.0	100.0
TraesCS7A01G339800.1	Wheat	nucleus	88.89	88.5
TraesCS7D01G347500.1	Wheat	nucleus	85.84	86.03
TraesCS7B01G251400.1	Wheat	nucleus	84.31	84.31
Os06t0348800-01	Rice	mitochondrion, plastid	65.58	66.15
Zm00001d044785_P001	Maize	nucleus	61.0	58.82
EER88132	Sorghum	nucleus	55.99	55.15
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	21.13	50.52
GSMUA_Achr10P...	Banana	nucleus	46.62	50.0
GSMUA_Achr7P11040_001	Banana	nucleus	45.75	49.3
GSMUA_Achr2P15250_001	Banana	nucleus	45.1	48.82
PGSC0003DMT400056255	Potato	nucleus	33.33	48.27
VIT_12s0028g03100.t01	Wine grape	nucleus	41.18	45.54
KRH22338	Soybean	nucleus	41.61	43.81
KRH26988	Soybean	nucleus	41.83	43.54
PGSC0003DMT400024265	Potato	nucleus	42.27	43.02
GSMUA_Achr6P05850_001	Banana	nucleus	41.18	42.95
KRH55898	Soybean	nucleus	39.0	42.02
KRH25644	Soybean	nucleus	38.34	41.12
Bra036015.1-P	Field mustard	nucleus	32.68	40.54
CDY14913	Canola	nucleus	33.33	40.37
Bra031129.1-P	Field mustard	nucleus	36.17	39.9
AT5G44190.1	Thale cress	nucleus	33.33	39.64
HORVU3Hr1G032440.2	Barley	nucleus	42.7	38.74
CDX96952	Canola	nucleus	30.72	38.42
AT2G20570.2	Thale cress	nucleus	36.17	38.07
CDY22303	Canola	nucleus	30.07	36.8
CDX94762	Canola	nucleus	30.07	36.8
CDY05773	Canola	nucleus	35.73	36.77
Bra036482.1-P	Field mustard	nucleus	34.64	36.64
Bra033726.1-P	Field mustard	nucleus	29.63	36.27
CDY31954	Canola	nucleus	34.64	35.33
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	41.61	35.17
HORVU3Hr1G032410.2	Barley	nucleus	10.46	22.97
CDX81968	Canola	nucleus	35.95	16.16

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EMBL:AK361623	EMBL:AK367495	UniProt:F2DCK6	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU0Hr1G010940	EnsemblPlants:HORVU0Hr1G010940.1	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF3
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002005DB2	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DCK6]

Coordinates

chrchrUn:+:61992631..61995204

Molecular Weight (calculated)

49131.3 Da

IEP (calculated)

5.698

GRAVY (calculated)

-0.396

Length

459 amino acids

Sequence
(BLAST)

001: MLAVSSARCL AADADEQRAE AAPMETVGGA AVVADLDIDF DFTVDDIDFG DFFLRLEDGD ALPDLEVDPA DIFTDLEAAA AGVQELQDQQ VPCAFLAAVE
101: DVGSVSSAGG VVGVENTAFG EEGRLGDEKR GCNQAEVGEN MSGGDRPIVP DAKSPSSTTS SSTEAESRHK SSGKSSHGKK KAKVDWTPEL HRRFVQAVEQ
201: LGIDKAVPSR ILEIMGINSL TRHNIASHLQ KYRSHRKHMM AREAEAASWT QRRQMYAAGG PAAAVKRQDS NMWTVPTIGF APPHPPAPPP PAAMQHYARP
301: LHVWGHPTMD SPRMPMWPRH PMPRAPMPAW APPPPPPSDP AFWHHPYMRG PAAYMPTHGT PCMAMPMAPK FPAPPVPVAM PCPVYAPPSP SPALASKSQQ
401: DSQLQLQSQP SNESIDAAIG DVLSKPWLPL PLGLKPPSLG SVMGELERQG VANVPQACG

Best Arabidopsis Sequence Match ( AT5G44190.1 )
(BLAST)

001: MLTVSPAPVL IGNNSKDTYM AADFADFTTE DLPDFTTVGD FSDDLLDGID YYDDLFIGFD GDDVLPDLEI DSEILGEYSG SGRDEEQEME GNTSTASETS
101: ERDVGVCKQE GGGGGDGGFR DKTVRRGKRK GKKSKDCLSD ENDIKKKPKV DWTPELHRKF VQAVEQLGVD KAVPSRILEI MNVKSLTRHN VASHLQKYRS
201: HRKHLLAREA EAASWNLRRH ATVAVPGVGG GGKKPWTAPA LGYPPHVAPM HHGHFRPLHV WGHPTWPKHK PNTPASAHRT YPMPAIAAAP ASWPGHPPYW
301: HQQPLYPQGY GMASSNHSSI GVPTRQLGPT NPPIDIHPSN ESIDAAIGDV ISKPWLPLPL GLKPPSVDGV MTELQRQGVS NVPPLP

Arabidopsis Description

GLK2Transcription activator GLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.