Factsheet for Bra036482.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31954	Canola	nucleus	96.54	93.11
CDY05773	Canola	nucleus	91.71	89.24
Bra031129.1-P	Field mustard	nucleus	65.67	68.51
AT2G20570.2	Thale cress	nucleus	67.05	66.74
Solyc10g008160.2.1	Tomato	mitochondrion, nucleus	20.05	45.31
VIT_12s0028g03100.t01	Wine grape	nucleus	43.09	45.06
PGSC0003DMT400056255	Potato	nucleus	32.26	44.16
KRH22338	Soybean	nucleus	43.78	43.58
KRH26988	Soybean	nucleus	42.86	42.18
KRH25644	Soybean	nucleus	41.47	42.06
GSMUA_Achr7P11040_001	Banana	nucleus	41.24	42.02
GSMUA_Achr10P...	Banana	nucleus	41.24	41.82
KRH55898	Soybean	nucleus	40.78	41.55
Bra036015.1-P	Field mustard	nucleus	35.02	41.08
Bra033726.1-P	Field mustard	nucleus	35.48	41.07
PGSC0003DMT400024265	Potato	nucleus	42.63	41.02
GSMUA_Achr2P15250_001	Banana	nucleus	38.48	39.39
Os06t0348800-01	Rice	mitochondrion, plastid	38.48	36.7
GSMUA_Achr6P05850_001	Banana	nucleus	37.1	36.59
TraesCS7D01G347500.1	Wheat	nucleus	37.33	35.37
EER88132	Sorghum	nucleus	37.79	35.19
Zm00001d039260_P002	Maize	nucleus	37.33	35.14
HORVU0Hr1G010940.1	Barley	nucleus	36.64	34.64
HORVU0Hr1G007770.1	Barley	nucleus	36.64	34.64
HORVU7Hr1G083690.1	Barley	nucleus	36.64	34.64
TraesCS7A01G339800.1	Wheat	nucleus	36.64	34.49
Zm00001d044785_P001	Maize	nucleus	37.56	34.24
HORVU3Hr1G032440.2	Barley	nucleus	39.86	34.19
Bra013279.1-P	Field mustard	nucleus	23.5	34.11
TraesCS7B01G251400.1	Wheat	nucleus	35.94	33.99
Solyc07g053630.2.1	Tomato	golgi, mitochondrion, nucleus, plastid	42.4	33.89
EES02166	Sorghum	nucleus	38.48	33.6
TraesCS3D01G168200.2	Wheat	nucleus	38.71	33.4
TraesCS3A01G161000.1	Wheat	nucleus	38.71	33.01
TraesCS3B01G191600.1	Wheat	nucleus	38.25	33.0
Os01t0239000-02	Rice	nucleus	39.86	32.1
Bra013278.1-P	Field mustard	nucleus	24.65	21.27
Bra013277.1-P	Field mustard	nucleus	24.65	21.27
Bra012623.1-P	Field mustard	nucleus	25.12	21.25
HORVU3Hr1G032410.2	Barley	nucleus	8.29	17.22

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.3	EnsemblPlantsGene:Bra036482	EnsemblPlants:Bra036482.1	EnsemblPlants:Bra036482.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4F5X6	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31312	PANTHER:PTHR31312:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002540EA8	SEG:seg	:	:

Description

AT2G20570 (E=5e-152) GPRI1, GLK1 | GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1); transcription factor/ transcription regulator

Coordinates

chrA07:-:139489..142688

Molecular Weight (calculated)

47468.9 Da

IEP (calculated)

7.517

GRAVY (calculated)

-0.559

Length

434 amino acids

Sequence
(BLAST)

001: MLALSPERNS TRDDGESEFL ATSGGARKFF INPEEDFPEF AIHGDLLDII DFDDLFGVAG DVLPDLEMDP EILGGDLSVH VNASSTITTT TSSSEKTESQ
101: GKANNKKGIS GKGEEVVSKR DHNETPLAET VVNYDGDSGR KRKHSSTGST KSNPISNNEG KRKVKKVDWT PELHRRFVEA VEKLGLEKAV PSRILELMGV
201: HCLTRHNVAS HLQKYRSHRK HLLAREAEAA NWTRKRHIYG LDSTGANANG RNRNGWLAPA PTLGYPPPPP AAVASPSVHH HHFRPLHVWG HPTVDQSVMP
301: HVWPKHLSPP STAMATPPFW VSDTPYWPRS HNGTTPYLPT VATRFTTPPV AGIPQALPSH HMVYNYKPDH GFGGPRSLVD LHPSKESVDA AIGDVLTRPW
401: LPLPLGLKPP AVDGVITELH RHGISDVPPA ASCA

Best Arabidopsis Sequence Match ( AT2G20570.1 )
(BLAST)

001: MLALSPATRD GCDGASEFLD TSCGFTIINP EEEEEFPDFA DHGDLLDIID FDDIFGVAGD VLPDLEIDPE ILSGDFSNHM NASSTITTTS DKTDSQGETT
101: KGSSGKGEEV VSKRDDVAAE TVTYDGDSDR KRKYSSSASS KNNRISNNEG KRKVKVDWTP ELHRRFVEAV EQLGVDKAVP SRILELMGVH CLTRHNVASH
201: LQKYRSHRKH LLAREAEAAN WTRKRHIYGV DTGANLNGRT KNGWLAPAPT LGFPPPPPVA VAPPPVHHHH FRPLHVWGHP TVDQSIMPHV WPKHLPPPST
301: AMPNPPFWVS DSPYWHPMHN GTTPYLPTVA TRFRAPPVAG IPHALPPHHT MYKPNLGFGG ARPPVDLHPS KESVDAAIGD VLTRPWLPLP LGLNPPAVDG
401: VMTELHRHGV SEVPPTASCA

Arabidopsis Description

GPRI1GBF's pro-rich region-interacting factor 1 [Source:UniProtKB/TrEMBL;Acc:F4IVF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.