Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54717 | Canola | nucleus | 91.13 | 96.62 |
| Bra024383.1-P | Field mustard | nucleus | 76.95 | 70.45 |
| Bra031858.1-P | Field mustard | nucleus | 74.11 | 69.9 |
| AT5G65420.3 | Thale cress | nucleus | 75.18 | 66.67 |
| Bra009031.1-P | Field mustard | nucleus | 58.16 | 55.22 |
| KRH69654 | Soybean | cytosol | 37.59 | 43.62 |
| Solyc11g010460.1.1 | Tomato | cytosol | 45.74 | 41.35 |
| Bra038518.1-P | Field mustard | nucleus | 41.84 | 40.69 |
| PGSC0003DMT400037827 | Potato | nucleus | 48.94 | 40.12 |
| Solyc05g051410.2.1 | Tomato | nucleus | 48.23 | 39.53 |
| Bra030232.1-P | Field mustard | nucleus | 47.16 | 37.46 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 32.98 | 37.35 |
| KRH45568 | Soybean | nucleus | 45.74 | 37.28 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 45.74 | 37.18 |
| VIT_00s0199g00210.t01 | Wine grape | nucleus | 45.74 | 36.54 |
| KRG99448 | Soybean | nucleus | 45.39 | 35.75 |
| GSMUA_Achr10P... | Banana | nucleus | 40.43 | 35.51 |
| KRH74510 | Soybean | nucleus | 45.39 | 35.46 |
| PGSC0003DMT400041637 | Potato | nucleus | 49.29 | 35.28 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 43.26 | 35.16 |
| TraesCS6B01G345300.1 | Wheat | plastid | 43.97 | 35.13 |
| HORVU6Hr1G077500.1 | Barley | nucleus | 43.62 | 35.04 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 44.33 | 34.92 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 43.26 | 34.86 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 42.2 | 34.1 |
| TraesCS6A01G314900.1 | Wheat | nucleus | 43.26 | 34.08 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 41.49 | 33.81 |
| GSMUA_Achr10P... | Banana | nucleus | 41.13 | 33.72 |
| Zm00001d018128_P001 | Maize | nucleus | 42.2 | 33.52 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 42.91 | 33.52 |
| Zm00001d052185_P001 | Maize | nucleus | 42.2 | 33.06 |
| EES07560 | Sorghum | nucleus | 41.49 | 32.68 |
| KXG19603 | Sorghum | nucleus | 39.72 | 32.18 |
| Bra007901.1-P | Field mustard | nucleus | 33.69 | 28.02 |
| TraesCS6D01G294200.1 | Wheat | nucleus | 22.7 | 25.4 |
| Bra012909.1-P | Field mustard | nucleus | 29.43 | 25.3 |
| Bra029992.1-P | Field mustard | nucleus | 30.85 | 24.72 |
| Bra034198.1-P | Field mustard | nucleus | 25.53 | 24.16 |
| Bra036051.1-P | Field mustard | nucleus | 30.14 | 24.08 |
| Bra034612.1-P | Field mustard | nucleus | 29.79 | 22.83 |
| Bra012146.1-P | Field mustard | nucleus | 28.37 | 22.6 |
| Bra011501.1-P | Field mustard | nucleus | 29.43 | 22.25 |
| Bra017629.1-P | Field mustard | nucleus | 28.37 | 21.74 |
| Bra017840.1-P | Field mustard | nucleus | 24.82 | 20.53 |
| Bra009612.1-P | Field mustard | cytosol | 21.99 | 18.24 |
| Bra005708.1-P | Field mustard | cytosol | 20.21 | 16.62 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EnsemblPlantsGene:Bra037817 | EnsemblPlants:Bra037817.1 | EnsemblPlants:Bra037817.1-P | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:M4F9Q4 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF337 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0002541B44 | SEG:seg |
Description
AT5G65420 (E=4e-105) CYCD4;1 | CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator
Coordinates
chrA09:-:3726773..3728566
Molecular Weight (calculated)
32276.0 Da
IEP (calculated)
4.990
GRAVY (calculated)
-0.221
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHLEQSLL CTETTNVGDE DNGMIVDKVL ISQMGFPLES QEIIREMMEK EKQHLPSDDY IKRLRSGDLD LNARRTEALN WIWKACEEHQ FGPLCVCLSV
101: NYLDRFLSVH DHPNIDKAWT MQLLAVACLS LAAKIEETEV PLLIDLQVGD PQFMFEPKSI QRMELLVLNR LEWRLRAITP CSYIRYFLRK MSKCDQEPSN
201: TLISRSLQVI ASKTKGIGFL DFRPSEVAAA VALSVSGEMH TVHFDNSPLF SLLQKETKQS VKLLKTLLVA GESEENWGYD RE
101: NYLDRFLSVH DHPNIDKAWT MQLLAVACLS LAAKIEETEV PLLIDLQVGD PQFMFEPKSI QRMELLVLNR LEWRLRAITP CSYIRYFLRK MSKCDQEPSN
201: TLISRSLQVI ASKTKGIGFL DFRPSEVAAA VALSVSGEMH TVHFDNSPLF SLLQKETKQS VKLLKTLLVA GESEENWGYD RE
001: MAEENLELSL LCTESNVDDE GMIVDETPIE ISIPQMGFSQ SESEEIIMEM VEKEKQHLPS DDYIKRLRSG DLDLNVGRRD ALNWIWKACE VHQFGPLCFC
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA CCFSFKTHDS
301: SSSYTHLS
101: LAMNYLDRFL SVHDLPSGKG WILQLLAVAC LSLAAKIEET EVPMLIDLQV GDPQFVFEAK SVQRMELLVL NKLKWRLRAI TPCSYIRYFL RKMSKCDQEP
201: SNTLISRSLQ VIASTTKGID FLEFRPSEVA AAVALSVSGE LQRVHFDNSS FSPLFSLLQK ERVKKIGEMI ESDGSDLCSQ TPNGVLEVSA CCFSFKTHDS
301: SSSYTHLS
Arabidopsis Description
CYCD4;1CYCLIN D41 [Source:UniProtKB/TrEMBL;Acc:F4KHY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.