Factsheet for AT5G02110.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55121	Canola	cytosol	64.81	64.43
Bra005708.1-P	Field mustard	cytosol	64.52	64.14
CDY10467	Canola	cytosol	63.34	63.72
CDY40332	Canola	cytosol	63.34	63.53
Bra009612.1-P	Field mustard	cytosol	63.34	63.53
CDX80803	Canola	cytosol	61.88	46.78
KRH75669	Soybean	cytosol	28.45	33.56
KRH65892	Soybean	cytosol	28.15	33.33
VIT_08s0007g00790.t01	Wine grape	nucleus	31.67	31.95
KRH54622	Soybean	cytosol	14.08	31.37
KRH54628	Soybean	cytosol	14.08	31.37
GSMUA_Achr10P...	Banana	cytosol	19.35	26.09
GSMUA_Achr6P34040_001	Banana	nucleus	20.53	25.45
TraesCS4A01G177400.1	Wheat	cytosol	23.17	23.72
TraesCS4B01G140400.1	Wheat	cytosol, nucleus, plastid	22.58	23.19
TraesCS4D01G135100.1	Wheat	cytosol, nucleus, plastid	22.58	22.85
Os11t0706801-00	Rice	nucleus	20.82	22.19
AT1G70210.1	Thale cress	nucleus	21.41	21.53
AT5G67260.2	Thale cress	nucleus	23.75	20.05
AT3G50070.1	Thale cress	nucleus	20.82	19.67
AT5G10440.1	Thale cress	nucleus	17.01	19.46
Zm00001d048594_P001	Maize	cytosol	23.75	19.06
OQU84124	Sorghum	nucleus	23.46	18.74
AT4G34160.1	Thale cress	nucleus	20.53	18.62
AT5G65420.3	Thale cress	nucleus	17.3	18.55
AT2G22490.2	Thale cress	nucleus	19.65	18.51
AT4G03270.1	Thale cress	nucleus	14.37	16.23
AT4G37630.1	Thale cress	nucleus	15.25	16.1

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	EntrezGene:831830	ProteinID:AED90432.1	ArrayExpress:AT5G02110	EnsemblPlantsGene:AT5G02110
RefSeq:AT5G02110	TAIR:AT5G02110	RefSeq:AT5G02110-TAIR-G	EnsemblPlants:AT5G02110.1	TAIR:AT5G02110.1	Unigene:At.54682
ProteinID:CAB82984.1	Symbol:CYCD7;1	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007049	GO:GO:0007275	GO:GO:0008150	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0051301	GO:GO:0051726	RefSeq:NP_195831.1
PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	PANTHER:PTHR10177	PANTHER:PTHR10177:SF215	UniProt:Q9LZM0
SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI00000AB539	:	:	:

Description

CYCD7-1Putative cyclin-D7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM0]

Coordinates

chr5:+:416917..418666

Molecular Weight (calculated)

39914.2 Da

IEP (calculated)

5.971

GRAVY (calculated)

-0.307

Length

341 amino acids

Sequence
(BLAST)

001: MDNLLCEESW PASPLTPEPL PNFRHRSHDN DVVKMYPEID AATMEEAIAM DLEKELCFNN HGDKFVEFFV SKKLTDYRFH AFQWLIQTRS RLNLSYETVF
101: SAANCFDRFV YMTCCDEWTN WMVELVAVTS LSIASKFNEV TTPLLEELEM EGLTHMFHVN TVAQMELIIL KALEWRVNAV TSYTFSQTLV SKIGMVGDHM
201: IMNRITNHLL DVICDLKMLQ YPPSVVATAA IWILMEDKVC RESIMNLFEQ NHKEKIVKCV DGMKNRDIDH QSSRRRYSEG RSILSLLQRG DVMNMNGDYN
301: VEDLSKIFQI FRYEKKKRDR GNHQDNIRPA KRMTIEMSNY I

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.