Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19935 | Canola | nucleus | 85.42 | 83.67 |
| CDX86277 | Canola | cytosol, mitochondrion, plastid | 35.42 | 62.96 |
| CDX85366 | Canola | nucleus | 65.1 | 60.39 |
| CDX86276 | Canola | nucleus | 65.1 | 60.39 |
| AT5G48820.2 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane, plastid | 60.94 | 48.75 |
| Solyc09g061280.2.1 | Tomato | nucleus | 46.35 | 47.34 |
| VIT_07s0005g06340.t01 | Wine grape | nucleus | 53.65 | 47.25 |
| PGSC0003DMT400045507 | Potato | nucleus | 46.88 | 45.45 |
| CDY71628 | Canola | nucleus | 42.71 | 41.21 |
| CDX93038 | Canola | nucleus | 42.19 | 40.7 |
| CDY59640 | Canola | nucleus | 23.96 | 36.51 |
| CDY23793 | Canola | nucleus | 41.67 | 32.79 |
| CDY12181 | Canola | nucleus | 40.1 | 32.22 |
| CDY19160 | Canola | nucleus | 39.06 | 30.86 |
| CDX84726 | Canola | nucleus | 39.58 | 30.77 |
| CDX79470 | Canola | nucleus | 38.02 | 29.44 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | GO:A0A078EH23 | InterPro:CDI | EnsemblPlants:CDY00044 | ProteinID:CDY00044 |
| ProteinID:CDY00044.1 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030234 |
| EnsemblPlantsGene:GSBRNA2T00109531001 | PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI0004EE67E5 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g02570D
Coordinates
chrLK031916:+:453937..455760
Molecular Weight (calculated)
21226.0 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.519
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYIKKSKI TGVIDSMEAT EAASLGVRTR AAAKTLALKR LNSSSALDSS CYLQLRSRRL EKPPSLVEPK QLKPGIKESG SKIDSVNSSV AGSGDECFCG
101: ENSPEFQTRQ STRESTPCNF VEDLEIIVTP GSSTRSMRTP TKDSTVPTIG ELEEFFAYAE QQQQRLFVEK YNFDIVNDVP LTGRYEWVQV SP
101: ENSPEFQTRQ STRESTPCNF VEDLEIIVTP GSSTRSMRTP TKDSTVPTIG ELEEFFAYAE QQQQRLFVEK YNFDIVNDVP LTGRYEWVQV SP
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.