Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86276 | Canola | nucleus | 92.27 | 92.27 |
| CDX86277 | Canola | cytosol, mitochondrion, plastid | 43.48 | 83.33 |
| CDY19935 | Canola | nucleus | 61.84 | 65.31 |
| CDY00044 | Canola | nucleus | 60.39 | 65.1 |
| AT5G48820.2 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane, plastid | 60.39 | 52.08 |
| VIT_07s0005g06340.t01 | Wine grape | nucleus | 48.79 | 46.33 |
| PGSC0003DMT400045507 | Potato | nucleus | 43.96 | 45.96 |
| Solyc09g061280.2.1 | Tomato | nucleus | 41.06 | 45.21 |
| CDY71628 | Canola | nucleus | 39.13 | 40.7 |
| CDX93038 | Canola | nucleus | 38.65 | 40.2 |
| CDY59640 | Canola | nucleus | 24.15 | 39.68 |
| CDY23793 | Canola | nucleus | 38.16 | 32.38 |
| CDY19160 | Canola | nucleus | 37.2 | 31.69 |
| CDY12181 | Canola | nucleus | 35.75 | 30.96 |
| CDX79470 | Canola | nucleus | 34.78 | 29.03 |
| CDX84726 | Canola | nucleus | 33.82 | 28.34 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | GO:A0A078D7U0 | InterPro:CDI | EnsemblPlants:CDX85366 | ProteinID:CDX85366 |
| ProteinID:CDX85366.1 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030234 |
| EnsemblPlantsGene:GSBRNA2T00143038001 | PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI0004EB427E |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g26770D
Coordinates
chrLK031841:-:1415061..1416736
Molecular Weight (calculated)
22905.5 Da
IEP (calculated)
6.049
GRAVY (calculated)
-0.825
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYMKKSKI TNNDTEPTEP TSLGVRTRAA KTLALKRLNS SASDSALAGD SSRYLQLRSR RLEKPMALTE PKQPPRIKES GSKGRVSSGS GSVHVDGDDW
101: FGKSDAFCGE NSPDSESRQS TRESTPCNFA EDLEIIVTPG SSTKSMRTAT RDCIRDGDSS VPSTSELEEF FAYAEQQQQR LFMDKYNFDI VNDVPLAGRY
201: EWVQVSP
101: FGKSDAFCGE NSPDSESRQS TRESTPCNFA EDLEIIVTPG SSTKSMRTAT RDCIRDGDSS VPSTSELEEF FAYAEQQQQR LFMDKYNFDI VNDVPLAGRY
201: EWVQVSP
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.