Factsheet for GSMUA_Achr8P30900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P09020_001
GSMUA_Achr9P17590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	GSMUA_Achr3P09020_001	AT1G18040.1	20706207
AT1G23190.1	GSMUA_Achr9P17590_001	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06680_001	Banana	cytosol	88.16	89.08
Os03t0712700-01	Rice	plasma membrane	86.96	87.11
KRH60387	Soybean	endoplasmic reticulum	84.22	84.36
KRH41685	Soybean	nucleus	83.7	83.85
Bra016357.1-P	Field mustard	plastid	83.36	83.36
CDY41458	Canola	plastid	83.02	83.02
AT1G23190.1	Thale cress	plastid	82.68	82.68
Solyc04g045340.2.1	Tomato	plastid	82.5	82.5
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	84.22	79.07
CDX91702	Canola	plastid	83.19	78.99
Zm00001d033746_P003	Maize	plastid	86.45	77.78
Zm00001d013428_P002	Maize	plasma membrane	86.11	77.23
EER93574	Sorghum	plastid	85.93	77.2
KRH65519	Soybean	cytosol	33.45	76.77
Bra024568.1-P	Field mustard	plastid	76.16	76.16
CDY04740	Canola	plastid	75.13	75.13
TraesCS4B01G047300.1	Wheat	plastid	83.36	75.0
HORVU4Hr1G007620.2	Barley	plasma membrane	83.36	74.65
TraesCS4A01G267000.1	Wheat	plastid	83.02	74.23
TraesCS4D01G047300.1	Wheat	plastid	82.33	73.85
AT1G70730.3	Thale cress	plastid	83.7	73.72
CDY21421	Canola	plastid	83.36	72.11
Zm00001d036664_P001	Maize	cytosol, mitochondrion	76.33	71.89
CDX91703	Canola	endoplasmic reticulum	19.55	69.94
Zm00001d036666_P001	Maize	mitochondrion	69.81	67.95
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	17.15	62.11
GSMUA_Achr8P19110_001	Banana	plastid	55.92	51.99

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	InterPro:Alpha-D-phosphohexomutase_SF
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016868	GO:GO:0046872	GO:GO:0071704	EnsemblPlantsGene:GSMUA_Achr8G30900_001	EnsemblPlants:GSMUA_Achr8P30900_001
EnsemblPlants:GSMUA_Achr8T30900_001	UniProt:M0TV42	PFAM:PF00408	PFAM:PF02878	PFAM:PF02879	PFAM:PF02880
PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573	PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957
UniParc:UPI000294F36C	SEG:seg	:	:	:	:

Description

Phosphoglucomutase, cytoplasmic 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G30900_001]

Coordinates

chr8:-:32778548..32787839

Molecular Weight (calculated)

63563.5 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.156

Length

583 amino acids

Sequence
(BLAST)

001: MVVFAVTRRE TVPFEGQKPG TSGLRKKVTV FKQPNYLHNF VQSTFNALPT DKVKGATLVV SGDGRYFSKD AVQIIIKMAA ANGVRRVWVG QNSLLSTPAV
101: SAVIRERVGA DGSKATGAFI LTASHNPGGP HEDFGIKYNM ENGGPAPEAI TDKIYANTKT LKEYFIAENL PDIDISVLSV STFSGPEGPF DVDVFDSTTD
201: YVKLMKSIFD FGSIQKLLSC PKFTFCYDAL HGVAGIYAKH IFVEELGANE SSLLNCTPKE DFGGGHPDPN LTYAKELVAR MGLGKSSSQF EPPEFGAAAD
301: GDADRNMVLG KRFFVTPSDS VAIIAANAVE AIPYFASGLK GVARSMPTSA ALDVVAKNLG LKFFEVPTGW KFFGNLMDAG LCSICGEESF GTGSDHIREK
401: DGIWAVLAWL SILAFKNKDK LNDDKLVTVE DIVRKHWATY GRHYYTRYDY ENVDAGAAKE LMAHLVNLQS SLSEVNRIIK EIRSDVSDVV QANEFEYKDP
501: VDGSVSKHQG IRYLFVDGSR LVFRLSGTGS EGATIRVYIE QYENDATKTG RDSQEALGPL VEVAIKLSKM KEFTGRSAPT VIT

Best Arabidopsis Sequence Match ( AT1G70730.1 )
(BLAST)

001: MVSFKVSLVS TSPIDGQKPG TSGLRKKVKV FKQPNYLENF VQATFNALTT EKVKGATLVV SGDGRYYSEQ AIQIIVKMAA ANGVRRVWVG QNSLLSTPAV
101: SAIIRERVGA DGSKATGAFI LTASHNPGGP TEDFGIKYNM ENGGPAPESI TDKIYENTKT IKEYPIAEDL PRVDISTIGI TSFEGPEGKF DVEVFDSADD
201: YVKLMKSIFD FESIKKLLSY PKFTFCYDAL HGVAGAYAHR IFVEELGAPE SSLLNCVPKE DFGGGHPDPN LTYAKELVAR MGLSKTDDAG GEPPEFGAAA
301: DGDADRNMIL GKRFFVTPSD SVAIIAANAV GAIPYFSSGL KGVARSMPTS AALDVVAKNL GLKFFEVPTG WKFFGNLMDA GMCSVCGEES FGTGSDHIRE
401: KDGIWAVLAW LSILAHKNKE TLDGNAKLVT VEDIVRQHWA TYGRHYYTRY DYENVDATAA KELMGLLVKL QSSLPEVNKI IKGIHPEVAN VASADEFEYK
501: DPVDGSVSKH QGIRYLFEDG SRLVFRLSGT GSEGATIRLY IEQYEKDASK IGRDSQDALG PLVDVALKLS KMQEFTGRSS PTVIT

Arabidopsis Description

PGM2Phosphoglucomutase/phosphomannomutase family protein [Source:UniProtKB/TrEMBL;Acc:F4I6W4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.