Factsheet for Bra016357.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016572.1-P
Bra031013.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	Bra016572.1-P	AT1G18040.1	20706207
AT1G23190.1	Bra031013.1-P	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41458	Canola	plastid	99.31	99.31
AT1G23190.1	Thale cress	plastid	96.4	96.4
CDX91702	Canola	plastid	98.97	93.97
CDX91703	Canola	endoplasmic reticulum	24.87	88.96
Bra024568.1-P	Field mustard	plastid	87.48	87.48
KRH60387	Soybean	endoplasmic reticulum	85.59	85.74
KRH41685	Soybean	nucleus	85.42	85.57
Solyc04g045340.2.1	Tomato	plastid	83.53	83.53
Os03t0712700-01	Rice	plasma membrane	83.36	83.51
GSMUA_Achr8P30900_001	Banana	cytosol	83.36	83.36
GSMUA_Achr2P06680_001	Banana	cytosol	80.96	81.8
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	85.93	80.68
KRH65519	Soybean	cytosol	32.93	75.59
Zm00001d033746_P003	Maize	plastid	83.02	74.69
EER93574	Sorghum	plastid	82.85	74.42
Zm00001d013428_P002	Maize	plasma membrane	82.85	74.31
HORVU4Hr1G007620.2	Barley	plasma membrane	82.33	73.73
TraesCS4B01G047300.1	Wheat	plastid	81.82	73.61
TraesCS4A01G267000.1	Wheat	plastid	82.16	73.47
TraesCS4D01G047300.1	Wheat	plastid	80.96	72.62
Zm00001d036664_P001	Maize	cytosol, mitochondrion	74.44	70.11
Zm00001d036666_P001	Maize	mitochondrion	67.75	65.94
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	16.12	58.39
Bra028278.1-P	Field mustard	plastid	58.32	54.14

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	InterPro:Alpha-D-phosphohexomutase_SF
EnsemblPlantsGene:Bra016357	EnsemblPlants:Bra016357.1	EnsemblPlants:Bra016357.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016868	GO:GO:0046872
GO:GO:0071704	UniProt:M4DIN0	PFAM:PF00408	PFAM:PF02878	PFAM:PF02879	PFAM:PF02880
PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573	PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957
UniParc:UPI00025463EB	SEG:seg	:	:	:	:

Description

AT1G23190 (E=0.0) | phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative

Coordinates

chrA08:-:18032003..18035912

Molecular Weight (calculated)

63423.3 Da

IEP (calculated)

5.729

GRAVY (calculated)

-0.236

Length

583 amino acids

Sequence
(BLAST)

001: MAFKVTVVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTPQ KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLMSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAEDLP NVDISAIGVT SFEGPEGKFD VEVFDSADDY
201: VKLMKSIFDF ESIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCVPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIEA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKDSI DGDTKLVTVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVANVS SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKIG RESQEALSPL VDIALKLSKM EEFTGRSAPT VIT

Best Arabidopsis Sequence Match ( AT1G23190.1 )
(BLAST)

001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

Arabidopsis Description

PGM3Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.