Factsheet for Zm00001d036664_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010476_P001
Zm00001d038109_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	Zm00001d010476_P001	AT1G18040.1	20706207
AT1G23190.1	Zm00001d038109_P002	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036666_P001	Maize	mitochondrion	80.78	83.47
Os03t0712700-01	Rice	plasma membrane	77.54	82.47
Zm00001d033746_P003	Maize	plastid	81.58	77.93
GSMUA_Achr2P06680_001	Banana	cytosol	71.73	76.95
Zm00001d013428_P002	Maize	plasma membrane	80.78	76.92
EER93574	Sorghum	plastid	80.29	76.58
GSMUA_Achr8P30900_001	Banana	cytosol	71.89	76.33
Bra016357.1-P	Field mustard	plastid	70.11	74.44
KRH65519	Soybean	cytosol	30.37	74.02
CDY41458	Canola	plastid	69.63	73.93
KRH60387	Soybean	endoplasmic reticulum	69.47	73.88
AT1G23190.1	Thale cress	plastid	69.47	73.76
KRH41685	Soybean	nucleus	68.98	73.37
Solyc04g045340.2.1	Tomato	plastid	68.82	73.07
TraesCS4B01G047300.1	Wheat	plastid	73.83	70.52
TraesCS4D01G047300.1	Wheat	plastid	73.99	70.46
CDX91702	Canola	plastid	69.63	70.2
TraesCS4A01G267000.1	Wheat	plastid	73.83	70.09
HORVU4Hr1G007620.2	Barley	plasma membrane	73.34	69.74
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	68.98	68.76
Bra024568.1-P	Field mustard	plastid	62.68	66.55
CDY04740	Canola	plastid	61.87	65.69
AT1G70730.3	Thale cress	plastid	69.47	64.95
CDY21421	Canola	plastid	69.14	63.5
CDX91703	Canola	endoplasmic reticulum	16.16	61.35
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	15.35	59.01
Zm00001d044211_P001	Maize	plastid	48.3	49.5

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	UniProt:A0A1D6LQ82
ProteinID:AQK81645.1	InterPro:Alpha-D-phosphohexomutase_SF	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016868	GO:GO:0071704	PFAM:PF00408
PFAM:PF02878	PFAM:PF02879	PFAM:PF02880	PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573
PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957	UniParc:UPI000843B86A	EnsemblPlantsGene:Zm00001d036664	EnsemblPlants:Zm00001d036664_P001
EnsemblPlants:Zm00001d036664_T001	SEG:seg	:	:	:	:

Description

Probable phosphoglucomutase cytoplasmic 1

Coordinates

chr6:+:97082640..97087215

Molecular Weight (calculated)

67021.4 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.083

Length

619 amino acids

Sequence
(BLAST)

001: MSGRMGWLKT FVSESRPHGS TVNMELKNEV DVWGATIVVS GDGRYFSKDA VQIITKMAAA NGVRRVWVGQ NSLMSTPVVS AVIRERIGAD GSKATGAFIL
101: TASHNPGGPK EDFGIKYNMG NGGPAPESVT DKIFSNTTTI SEYLISEDLP DVDISVVGVT SFSEPEGPFD VDVFDSSVNY IKLMKTIFDF EAIKKLLTSP
201: KFTFCYDVLH GVAGAYAKHI FVEELGADES SLLNCVPKED FGGGHPDPNL TYAKELVERM GLGKSSSNVE PPEFGAAADG DADRNMILGK RFFVTPSDSV
301: AIIAANAVQS IPYFASGLKG VARSMPTSAA LDVVAKNLNL KFFEVPTGWN FFGNLMDAGM CSICGEESFG TGSDHIREKD GIWAVLAWLS IIAFKNKDNL
401: GGDKLVTVED IVRQHWATYG RHYYSRYDYE NVDAGAAKEL MANLVSMQSS LSDVNKLIKE IRSDVSEVVA AVEFEYKDHV DGSVAKNQGI RYLFGDGSRL
501: VFRLSRTGSV GATIRVYIEQ YEKDSSKTGR DSQEALAPLV VGIRETVLTS SSEQSISALP CDIPSTIAFP REFEGKGSTV GLEELGLRVA LVDSMLHKFV
601: NFRIEGEVAE AVADAVDGL

Best Arabidopsis Sequence Match ( AT1G23190.1 )
(BLAST)

001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

Arabidopsis Description

PGM3Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.