Factsheet for Zm00001d013428_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 18521681
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 18521681 doi

P Carletti, A Masi, B Spolaore, P Polverino De Laureto, M De Zorzi, L Turetta, M Ferretti, S Nardi

Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010476_P001
Zm00001d038109_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	Zm00001d010476_P001	AT1G18040.1	20706207
AT1G23190.1	Zm00001d038109_P002	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0712700-01	Rice	plasma membrane	85.08	95.02
Zm00001d033746_P003	Maize	plastid	93.23	93.52
EER93574	Sorghum	plastid	89.69	89.83
GSMUA_Achr8P30900_001	Banana	cytosol	77.23	86.11
GSMUA_Achr2P06680_001	Banana	cytosol	75.08	84.58
KRH60387	Soybean	endoplasmic reticulum	75.08	83.85
TraesCS4B01G047300.1	Wheat	plastid	83.38	83.64
KRH41685	Soybean	nucleus	74.77	83.51
TraesCS4A01G267000.1	Wheat	plastid	83.69	83.44
HORVU4Hr1G007620.2	Barley	plasma membrane	83.08	82.95
Bra016357.1-P	Field mustard	plastid	74.31	82.85
Solyc04g045340.2.1	Tomato	plastid	74.31	82.85
CDY41458	Canola	plastid	74.0	82.5
TraesCS4D01G047300.1	Wheat	plastid	82.46	82.46
AT1G23190.1	Thale cress	plastid	73.85	82.33
Zm00001d036664_P001	Maize	cytosol, mitochondrion	76.92	80.78
CDX91702	Canola	plastid	74.0	78.34
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	74.46	77.94
Zm00001d036666_P001	Maize	mitochondrion	70.77	76.79
Bra024568.1-P	Field mustard	plastid	67.38	75.13
CDY04740	Canola	plastid	66.77	74.44
KRH65519	Soybean	cytosol	29.08	74.41
AT1G70730.3	Thale cress	plastid	74.92	73.56
CDY21421	Canola	plastid	73.54	70.92
CDX91703	Canola	endoplasmic reticulum	17.54	69.94
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	14.77	59.63
Zm00001d044211_P001	Maize	plastid	50.46	54.3

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	UniProt:A0A1D6GJ73
ProteinID:AQK63458.1	InterPro:Alpha-D-phosphohexomutase_SF	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016868	GO:GO:0071704	PFAM:PF00408
PFAM:PF02878	PFAM:PF02879	PFAM:PF02880	PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573
PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957	UniParc:UPI00022166C5	EnsemblPlantsGene:Zm00001d013428	EnsemblPlants:Zm00001d013428_P002
EnsemblPlants:Zm00001d013428_T002	SEG:seg	:	:	:	:

Description

phosphoglucomutase2 phosphoglucomutase2

Coordinates

chr5:-:11195010..11201017

Molecular Weight (calculated)

70797.2 Da

IEP (calculated)

7.769

GRAVY (calculated)

-0.196

Length

650 amino acids

Sequence
(BLAST)

001: MIQHRPLVLS LPSPAIIPPR PRRHRHHTTT PSLPSHSRSL LHHRFLRVTH LVVASRGDQR RTLRGATMGL FTVTKKATTP FDGQKPGTSG LRKKVTVFQQ
101: PHYLQNFVQS TFNALPVDQV RGATIVVSGD GRYFSKDAVQ IITKMAAANG VRRVWVGQNS LMSTPAVSAV IRERVGADGS KATGAFILTA SHNPGGPKED
201: FGIKYNMGNG GPAPESVTDK IFSNTTTISE YLISEDLPDV DISVVGVTSF SGPEGPFDVD VFDSSVDYIK LMKTIFDFEA IKKLLTSPKF TFCYDALHGV
301: AGAYAKHIFV EELGADESSL LNCVPKEDFG GGHPDPNLTY AKELVERMGL GKSSSNVEPP EFGAAADGDA DRNMILGKRF FVTPSDSVAI IAANAVQSIP
401: YFASGLKGVA RSMPTSAALD VVAKNLNLKF FEVPTGWKFF GNLMDAGMCS ICGEESFGTG SDHIREKDGI WAVLAWLSII AFKNKDNLGG DKLVTVEDIV
501: RQHWATYGRH YYTRYDYENV DAGAAKELMA NLVSMQSSLS DVNKLVKEIR SDVSEVVAAD EFEYKDPVDG SVSKHQGIRY LFGDGSRLVF RLSGTGSVGA
601: TIRVYIEQYE RDSSKTGRDS QDALAPLVDV ALKLSKMQEY TGRSAPTVIT

Best Arabidopsis Sequence Match ( AT1G23190.1 )
(BLAST)

001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

Arabidopsis Description

PGM3Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.