Factsheet for Zm00001d033746_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plasma membrane: 18521681
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
cytosol: 28250383

msms PMID: 28250383 doi

CN Meisrimler, F Buck, S Lüthje

University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 18521681 doi

P Carletti, A Masi, B Spolaore, P Polverino De Laureto, M De Zorzi, L Turetta, M Ferretti, S Nardi

Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010476_P001
Zm00001d038109_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	Zm00001d010476_P001	AT1G18040.1	20706207
AT1G23190.1	Zm00001d038109_P002	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0712700-01	Rice	plasma membrane	85.49	95.19
Zm00001d013428_P002	Maize	plasma membrane	93.52	93.23
EER93574	Sorghum	plastid	89.97	89.83
GSMUA_Achr8P30900_001	Banana	cytosol	77.78	86.45
GSMUA_Achr2P06680_001	Banana	cytosol	75.46	84.75
TraesCS4A01G267000.1	Wheat	plastid	84.26	83.74
TraesCS4B01G047300.1	Wheat	plastid	83.64	83.64
HORVU4Hr1G007620.2	Barley	plasma membrane	83.95	83.56
KRH60387	Soybean	endoplasmic reticulum	75.0	83.51
Solyc04g045340.2.1	Tomato	plastid	75.0	83.36
TraesCS4D01G047300.1	Wheat	plastid	83.33	83.08
Bra016357.1-P	Field mustard	plastid	74.69	83.02
KRH41685	Soybean	nucleus	74.54	82.99
AT1G23190.1	Thale cress	plastid	74.38	82.68
CDY41458	Canola	plastid	74.38	82.68
Zm00001d036664_P001	Maize	cytosol, mitochondrion	77.93	81.58
CDX91702	Canola	plastid	74.38	78.5
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	74.38	77.62
Zm00001d036666_P001	Maize	mitochondrion	71.6	77.46
Bra024568.1-P	Field mustard	plastid	67.59	75.13
CDY04740	Canola	plastid	66.98	74.44
KRH65519	Soybean	cytosol	29.17	74.41
AT1G70730.3	Thale cress	plastid	75.15	73.56
CDY21421	Canola	plastid	73.92	71.07
CDX91703	Canola	endoplasmic reticulum	17.75	70.55
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	14.81	59.63
Zm00001d044211_P001	Maize	plastid	50.46	54.14

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	UniProt:A0A1D6L1Y9
InterPro:Alpha-D-phosphohexomutase_SF	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004614	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006006
GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	GO:GO:0016868	GO:GO:0046872	GO:GO:0071704
ProteinID:ONM08524.1	ProteinID:ONM08528.1	PFAM:PF00408	PFAM:PF02878	PFAM:PF02879	PFAM:PF02880
PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573	PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957
UniParc:UPI000222087D	EnsemblPlantsGene:Zm00001d033746	EnsemblPlants:Zm00001d033746_P003	EnsemblPlants:Zm00001d033746_T003	SEG:seg	:

Description

phosphoglucomutase1 phosphoglucomutase1

Coordinates

chr1:+:272697870..272704606

Molecular Weight (calculated)

70465.9 Da

IEP (calculated)

7.473

GRAVY (calculated)

-0.164

Length

648 amino acids

Sequence
(BLAST)

001: MIHPLVLSLP FPAIISRPRR HRHHTTTPSL PSHSRSLHHY RLLRFTPLVA SCGDRRRIVR GASATMGLFT VTKKATTPFE GQKPGTSGLR KKVTVFQQPH
101: YLQNFVQSTF NALPADQVKG ATIVVSGDGR YFSKDAVQII TKMAAANGVR RVWVGQNSLM STPAVSAVIR ERIGADGSKA TGAFILTASH NPGGPTEDFG
201: IKYNMGNGGP APESVTDKIF SNTTTISEYL ISEDLPDVDI SVVGVTSFSG PEGPFDVDVF DSSVNYIKLM KTIFDFEAIK KLLTSPKFTF CYDALHGVAG
301: AYAKHIFVEE LGADESSLLN CVPKEDFGGG HPDPNLTYAK ELVERMGLGK SSSNVEPPEF GAAADGDADR NMILGKRFFV TPSDSVAIIA ANAVQSIPYF
401: ASGLKGVARS MPTSAALDVV AKNLNLKFFE VPTGWKFFGN LMDAGMCSIC GEESFGTGSD HIREKDGIWA VLAWLSIIAF KNKDNLGGDK LVTVEDIVRQ
501: HWATYGRHYY TRYDYENVDA GAAKELMANL VSMQSSLSDV NKLIKEIRSD VSEVVAADEF EYKDPVDGSV SKHQGIRYLF GDGSRLVFRL SGTGSVGATI
601: RVYIEQYEKD SSKTGRDSQE ALAPLVDVAL KLSKMQEYTG RSAPTVIT

Best Arabidopsis Sequence Match ( AT1G23190.1 )
(BLAST)

001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

Arabidopsis Description

PGM3Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.