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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 18372294
plasma membrane: 19502382
nucleus: 23777608
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797
extracellular: 28232208
msms PMID: 23777608 doi
H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P30900_001 Banana cytosol 87.11 86.96
Zm00001d033746_P003 Maize plastid 95.19 85.49
EER93574 Sorghum plastid 95.02 85.21
Zm00001d013428_P002 Maize plasma membrane 95.02 85.08
GSMUA_Achr2P06680_001 Banana cytosol 84.02 84.75
KRH60387 Soybean endoplasmic reticulum 83.85 83.85
Bra016357.1-P Field mustard plastid 83.51 83.36
Solyc04g045340.2.1 Tomato plastid 83.33 83.19
KRH41685 Soybean nucleus 83.16 83.16
CDY41458 Canola plastid 83.16 83.02
AT1G23190.1 Thale cress plastid 82.82 82.68
HORVU4Hr1G007620.2 Barley plasma membrane 90.72 81.11
TraesCS4B01G047300.1 Wheat plastid 89.86 80.71
TraesCS4A01G267000.1 Wheat plastid 90.03 80.37
TraesCS4D01G047300.1 Wheat plastid 89.0 79.69
CDX91702 Canola plastid 83.16 78.83
VIT_01s0011g05370.t01 Wine grape cytosol, mitochondrion 82.99 77.78
Zm00001d036664_P001 Maize cytosol, mitochondrion 82.47 77.54
Bra024568.1-P Field mustard plastid 75.26 75.13
KRH65519 Soybean cytosol 32.65 74.8
CDY04740 Canola plastid 74.57 74.44
AT1G70730.3 Thale cress plastid 84.02 73.87
Zm00001d036666_P001 Maize mitochondrion 75.94 73.79
CDY21421 Canola plastid 82.47 71.22
CDX91703 Canola endoplasmic reticulum 19.07 68.1
KRH65565 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 16.67 60.25
Os10t0189100-01 Rice plastid 57.39 54.84
Protein Annotations
KEGG:00520+5.4.2.10MapMan:3.1.2.5Gene3D:3.30.310.50Gene3D:3.40.120.10EntrezGene:4333895InterPro:A-D-PHexomutase_C
InterPro:A-D-PHexomutase_CSInterPro:A-D-PHexomutase_C_sfInterPro:A-D-PHexomutase_a/b/a-IInterPro:A-D-PHexomutase_a/b/a-I/II/IIIInterPro:A-D-PHexomutase_a/b/a-IIInterPro:A-D-PHexomutase_a/b/a-III
ProteinID:AAK18846.1ProteinID:ABF98526.1EMBL:AK072313InterPro:Alpha-D-phosphohexomutase_SFProteinID:BAF12980.1ProteinID:BAS86047.1
ProteinID:EEE59804.1GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004614GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975
GO:GO:0005978GO:GO:0006006GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009536GO:GO:0009570GO:GO:0009590GO:GO:0009605GO:GO:0009628
GO:GO:0009987GO:GO:0010319GO:GO:0016868GO:GO:0019252GO:GO:0019388GO:GO:0046872
GO:GO:0071704EMBL:JN944360EnsemblPlantsGene:Os03g0712700EnsemblPlants:Os03t0712700-01PFAM:PF00408PFAM:PF02878
PFAM:PF02879PFAM:PF02880PRINTS:PR00509ScanProsite:PS00710PANTHER:PTHR22573PANTHER:PTHR22573:SF47
UniProt:Q9AUQ4SUPFAM:SSF53738SUPFAM:SSF55957UniParc:UPI00000A31F8RefSeq:XP_015632142.1:
Description
fructose-6-phosphate 1-phosphotransferaseCytosolic phosphoglucomutase (Os03t0712700-01);Similar to Phosphoglucomutase. (Os03t0712700-02);Similar to Phosphoglucomutase. (Os03t0712700-03)
Coordinates
chr3:+:28813619..28820086
Molecular Weight (calculated)
62952.6 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.146
Length
582 amino acids
Sequence
(BLAST)
001: MVLFSVTKKA TTPFDGQKPG TSGLRKKVTV FQQPHYLQNF VQSTFNALPA DKVKGATIVV SGDGRYFSKD AVQIITKMAA ANGVRRVWVG QNSLMSTPAV
101: SAVIRERVGA DGSKATGAFI LTASHNPGGP TEDFGIKYNM ENGGPAPESV TDKIFSNTTT ITEYLIAEDL PDVDISVVGV TTFSGPEGPF DVDVFDSTID
201: YIKLMKTIFD FESIKKLLAS PKFTFCYDAL HGVAGTYATR IFVEELGAAE SSLLNCVPKE DFGGGHPDPN LTYAKELVDR MGLGKSSNAE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAVQS IPYFSSGLKG VARSMPTSAA LDVVAKNLNL KFFEVPTGWK FFGNLMDAGM CSICGEESFG TGSDHIREKD
401: GIWAVLAWLS ILAFKNKDNL GGDKLVTVED IVRQHWGTYG RHYYTRYDYE NVDAGAAKEL MANLVSMQSS LSDVNKLIKE IRSDVSDVVA ADEFEYKDPV
501: DGSVSKHQGV RYLFGDGSRL VFRLSGTGSV GATIRVYIEQ YEKDSSKTGR DSQDALAPLV DVALKLSKMQ EYTGRSAPTV IT
Best Arabidopsis Sequence Match ( AT1G70730.3 )
(BLAST)
001: MFLLVTSCFL PDSGSSVKVS LFIFGTKRDP TKKKNEKRRA TRVTFSFSLF ISFPQTHCVK RLLFYHLQAY SIFFRFEMVS FKVSLVSTSP IDGQKPGTSG
101: LRKKVKVFKQ PNYLENFVQA TFNALTTEKV KGATLVVSGD GRYYSEQAIQ IIVKMAAANG VRRVWVGQNS LLSTPAVSAI IRERVGADGS KATGAFILTA
201: SHNPGGPTED FGIKYNMENG GPAPESITDK IYENTKTIKE YPIAEDLPRV DISTIGITSF EGPEGKFDVE VFDSADDYVK LMKSIFDFES IKKLLSYPKF
301: TFCYDALHGV AGAYAHRIFV EELGAPESSL LNCVPKEDFG GGHPDPNLTY AKELVARMGL SKTDDAGGEP PEFGAAADGD ADRNMILGKR FFVTPSDSVA
401: IIAANAVGAI PYFSSGLKGV ARSMPTSAAL DVVAKNLGLK FFEVPTGWKF FGNLMDAGMC SVCGEESFGT GSDHIREKDG IWAVLAWLSI LAHKNKETLD
501: GNAKLVTVED IVRQHWATYG RHYYTRYDYE NVDATAAKEL MGLLVKLQSS LPEVNKIIKG IHPEVANVAS ADEFEYKDPV DGSVSKHQGI RYLFEDGSRL
601: VFRLSGTGSE GATIRLYIEQ YEKDASKIGR DSQDALGPLV DVALKLSKMQ EFTGRSSPTV IT
Arabidopsis Description
PGM2Phosphoglucomutase/phosphomannomutase family protein [Source:UniProtKB/TrEMBL;Acc:F4I6W4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.