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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
 plastid: 27992503
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03286 Sorghum mitochondrion, plastid 86.7 86.84
Zm00001d044211_P001 Maize plastid 84.24 84.93
VIT_16s0022g02320.t01 Wine grape plastid 79.64 78.99
GSMUA_Achr8P19110_001 Banana plastid 79.64 77.35
Bra028278.1-P Field mustard plastid 78.49 76.11
Solyc03g006870.2.1 Tomato plastid 78.98 76.11
CDY64652 Canola plastid 78.16 75.68
AT5G51820.1 Thale cress plastid 77.18 75.44
KRH35404 Soybean nucleus 77.5 75.16
CDY00500 Canola plastid 78.16 74.96
KRG91417 Soybean nucleus 76.68 74.36
Os03t0712700-01 Rice plasma membrane 54.84 57.39
Protein Annotations
KEGG:00520+5.4.2.10MapMan:3.2.2.2Gene3D:3.30.310.50Gene3D:3.40.120.10EntrezGene:4348230InterPro:A-D-PHexomutase_C
InterPro:A-D-PHexomutase_CSInterPro:A-D-PHexomutase_C_sfInterPro:A-D-PHexomutase_a/b/a-IInterPro:A-D-PHexomutase_a/b/a-I/II/IIIInterPro:A-D-PHexomutase_a/b/a-IIInterPro:A-D-PHexomutase_a/b/a-III
ProteinID:ABB46982.1EMBL:AK064893InterPro:Alpha-D-phosphohexomutase_SFProteinID:BAF26185.1ProteinID:BAT10180.1ProteinID:EEE50681.1
GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004614GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0005978
GO:GO:0006006GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058
GO:GO:0009536GO:GO:0009570GO:GO:0009590GO:GO:0009605GO:GO:0009628GO:GO:0009987
GO:GO:0010319GO:GO:0016868GO:GO:0019252GO:GO:0019388GO:GO:0046872GO:GO:0071704
EnsemblPlantsGene:Os10g0189100EnsemblPlants:Os10t0189100-01PFAM:PF00408PFAM:PF02878PFAM:PF02879PFAM:PF02880
PRINTS:PR00509ScanProsite:PS00710PANTHER:PTHR22573PANTHER:PTHR22573:SF47UniProt:Q33AE4SUPFAM:SSF53738
SUPFAM:SSF55957SignalP:SignalP-noTMUniParc:UPI000009F0BDRefSeq:XP_015614961.1SEG:seg:
Description
Phosphoglucomutase, plastidic phosphoglucomutasePlastidic phosphoglucomutase, Starch synthesis in rice pollen (Os10t0189100-01)
Coordinates
chr10:-:6167200..6174593
Molecular Weight (calculated)
66116.5 Da
IEP (calculated)
6.659
GRAVY (calculated)
-0.189
Length
609 amino acids
Sequence
(BLAST)
001: MASHALRLHP LLFSAAAARP APLAARPGGG ARRVHRRHSL AVVRCSSSAA QALKIKSIPT KPVEGQKTGT SGLRKKVKVF QQENYLANWI QALFNSLPPE
101: DYVGGTLVLG GDGRYFNKDA AQIITKIAAG NGVGKILVGR NGLLSTPAVS AVIRKRQANG GFIMSASHNP GGPDNDWGIK FNYSSGQPAP ETITDQIYGN
201: TLSISEIKTA DIPDVDLSSL GVVSYGDFTV EVIDPVLDYL ELMENVFDFQ LIKGLLSRPD FRFVFDAMHA VTGAYADPIF VEKLGADPDY ILNGVPLEDF
301: GNGHPDPNLT YAKELVFTMF GSGAPDFGAA SDGDGDRNMI LGRRFFVTPS DSVAIIAANA QAAIPYFQSG PKGLARSMPT SGALDRVADK LNVPFFEVPT
401: GWKFFGNLMD AGKLSICGEE SFGTGSDHIR EKDGIWAVLA WLSILAHRNK DKKAGERLVS VEDVAREHWA TYGRNFFSRY DYEECESESA NKMMEHLRDV
501: IAKSKPGEKY GNYTLQFADD FSYTDPVDGS TVSKQGLRFV FTDGSRIIFR LSGTGSAGAT IRIYIEQFES DASKHDLDAQ IALKPLIDLA LSVSKLKDFT
601: GRDKPTVIT
Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Arabidopsis Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.