Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028278.1-P | Field mustard | plastid | 88.44 | 87.74 |
| CDY64652 | Canola | plastid | 87.8 | 86.96 |
| CDY00500 | Canola | plastid | 88.28 | 86.61 |
| VIT_16s0022g02320.t01 | Wine grape | plastid | 81.06 | 82.25 |
| KRH35404 | Soybean | nucleus | 80.74 | 80.1 |
| Solyc03g006870.2.1 | Tomato | plastid | 80.1 | 78.96 |
| KRG91417 | Soybean | nucleus | 79.29 | 78.66 |
| Os10t0189100-01 | Rice | plastid | 75.44 | 77.18 |
| GSMUA_Achr8P19110_001 | Banana | plastid | 76.4 | 75.92 |
| EES03286 | Sorghum | mitochondrion, plastid | 73.84 | 75.66 |
| Zm00001d044211_P001 | Maize | plastid | 70.63 | 72.85 |
| AT1G23190.1 | Thale cress | plastid | 54.41 | 58.15 |
| AT1G70730.3 | Thale cress | plastid | 54.74 | 51.51 |
Protein Annotations
| KEGG:00520+5.4.2.10 | MapMan:3.2.2.2 | Gene3D:3.30.310.50 | Gene3D:3.40.120.10 | EntrezGene:835257 | InterPro:A-D-PHexomutase_C |
| InterPro:A-D-PHexomutase_CS | InterPro:A-D-PHexomutase_C_sf | InterPro:A-D-PHexomutase_a/b/a-I | InterPro:A-D-PHexomutase_a/b/a-I/II/III | InterPro:A-D-PHexomutase_a/b/a-II | InterPro:A-D-PHexomutase_a/b/a-III |
| ProteinID:AED96131.1 | EMBL:AF216580 | EMBL:AJ242601 | ArrayExpress:AT5G51820 | EnsemblPlantsGene:AT5G51820 | RefSeq:AT5G51820 |
| TAIR:AT5G51820 | RefSeq:AT5G51820-TAIR-G | EnsemblPlants:AT5G51820.1 | TAIR:AT5G51820.1 | EMBL:AY099708 | EMBL:AY128901 |
| InterPro:Alpha-D-phosphohexomutase_SF | ProteinID:BAB11251.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004614 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005975 | GO:GO:0005978 | GO:GO:0006006 | GO:GO:0006091 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009590 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0010319 | GO:GO:0016853 | GO:GO:0016868 | GO:GO:0019252 | GO:GO:0019388 |
| GO:GO:0046872 | GO:GO:0048046 | GO:GO:0071704 | RefSeq:NP_199995.1 | PFAM:PF00408 | PFAM:PF02878 |
| PFAM:PF02879 | PFAM:PF02880 | Symbol:PGM | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00509 | ScanProsite:PS00710 | PANTHER:PTHR22573 |
| PANTHER:PTHR22573:SF47 | UniProt:Q9SCY0 | SUPFAM:SSF53738 | SUPFAM:SSF55957 | UniParc:UPI00000011AA | SEG:seg |
Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
Coordinates
chr5:-:21063298..21068327
Molecular Weight (calculated)
67992.5 Da
IEP (calculated)
5.429
GRAVY (calculated)
-0.174
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.