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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 9
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH35404 Soybean nucleus 87.74 87.74
VIT_16s0022g02320.t01 Wine grape plastid 79.46 81.27
CDY64652 Canola plastid 80.1 79.97
Bra028278.1-P Field mustard plastid 79.62 79.62
Solyc03g006870.2.1 Tomato plastid 79.94 79.43
AT5G51820.1 Thale cress plastid 78.66 79.29
CDY00500 Canola plastid 79.46 78.58
Os10t0189100-01 Rice plastid 74.36 76.68
GSMUA_Achr8P19110_001 Banana plastid 76.27 76.4
EES03286 Sorghum mitochondrion, plastid 72.61 75.0
Zm00001d044211_P001 Maize plastid 69.59 72.35
KRH60387 Soybean endoplasmic reticulum 53.03 57.22
KRH41685 Soybean nucleus 52.87 57.04
KRH65519 Soybean cytosol 21.82 53.94
KRH65565 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 11.94 46.58
Protein Annotations
KEGG:00520+5.4.2.10EntrezGene:100778321MapMan:3.2.2.2Gene3D:3.30.310.50Gene3D:3.40.120.10InterPro:A-D-PHexomutase_C
InterPro:A-D-PHexomutase_CSInterPro:A-D-PHexomutase_C_sfInterPro:A-D-PHexomutase_a/b/a-IInterPro:A-D-PHexomutase_a/b/a-I/II/IIIInterPro:A-D-PHexomutase_a/b/a-IIInterPro:A-D-PHexomutase_a/b/a-III
EMBL:ACUP02012684InterPro:Alpha-D-phosphohexomutase_SFEnsemblPlantsGene:GLYMA_20G153600GO:GO:0000287GO:GO:0003674GO:GO:0003824
GO:GO:0004614GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0005975GO:GO:0005978GO:GO:0006006GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009536GO:GO:0009570GO:GO:0009590
GO:GO:0009605GO:GO:0009628GO:GO:0009987GO:GO:0010319GO:GO:0016868GO:GO:0019252
GO:GO:0019388GO:GO:0071704UniProt:I1NGN4EnsemblPlants:KRG91417ProteinID:KRG91417ProteinID:KRG91417.1
PFAM:PF00408PFAM:PF02878PFAM:PF02879PFAM:PF02880PRINTS:PR00509ScanProsite:PS00710
PANTHER:PTHR22573PANTHER:PTHR22573:SF47MetaCyc:PWY-6749SUPFAM:SSF53738SUPFAM:SSF55957UniParc:UPI000233DE18
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr20:-:39245522..39256513
Molecular Weight (calculated)
68424.6 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.134
Length
628 amino acids
Sequence
(BLAST)
001: MAFSCKLDCF ILPAYKPQNS ILPLSIQPSS FLPSPSSFKP QKLPFGIRYG STIRVTSSSS TPSTTIAEPE GIKIKSIPTK PIEGQKTGTS GLRKKVKVFM
101: QDNYLANWIQ ALFNSLPPED YKNGLLVLGG DGRYFNREAA QIIIKIAAGN GVGKILVGQE GILSTPAVSA VIRKRKANGG FIMSASHNPG GPEYDWGIKF
201: NYSSGQPAPE SITDKIYGNT LSISVIKIAD ILDVDISKVG VTKFGSFSVE VIDPVSDYLE LLETVFDFQL IKGLLSRPDF RFIFDAMHAV TGAYAKPILV
301: DKLGASLDSI SNGIPLEDFG HGHPDPNLTY AKDLVNILYA ENGPDFGAAS DGDGDRNMIL GRSFFVTPSD SVAVIAANAR EAVPYFKNGV KGLARSMPTS
401: GALDRVAEKL DLPFFEVPTG WKFFGNLMDA GNLSVCGEES FGTGSDHIRE KDGIWAVLAW LSIIAHRNKD KKPGEKLISV SDIVTEHWAT YGRNFFSRYD
501: YEECESEGAN KMIEHLRDIV SKSKPGDQYG SYVLQFADDF AYTDPVDGSV VSKQGVRFVF TDGSRIIYRL SGTGSAGATV RVYIEQFEPD VSKHDVDAQI
601: ALKPLIDLAI SMSKLKDFTG REKPTVIT
Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Arabidopsis Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.