Factsheet for VIT_16s0022g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006870.2.1	Tomato	plastid	83.71	81.33
AT5G51820.1	Thale cress	plastid	82.25	81.06
Bra028278.1-P	Field mustard	plastid	82.74	80.89
CDY64652	Canola	plastid	82.74	80.76
KRH35404	Soybean	nucleus	82.25	80.41
CDY00500	Canola	plastid	82.41	79.69
Os10t0189100-01	Rice	plastid	78.99	79.64
KRG91417	Soybean	nucleus	81.27	79.46
GSMUA_Achr8P19110_001	Banana	plastid	80.13	78.47
EES03286	Sorghum	mitochondrion, plastid	76.71	77.47
Zm00001d044211_P001	Maize	plastid	73.45	74.67
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	54.89	54.27

Protein Annotations

KEGG:00520+5.4.2.10	EntrezGene:100247590	wikigene:100247590	MapMan:3.2.2.2	Gene3D:3.30.310.50	Gene3D:3.40.120.10
InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS	InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II
InterPro:A-D-PHexomutase_a/b/a-III	EMBL:AM471752	InterPro:Alpha-D-phosphohexomutase_SF	ProteinID:CAN72717	ProteinID:CAN72717.1	ProteinID:CBI24469
ProteinID:CBI24469.3	UniProt:D7T1T9	EMBL:FN595506	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004614	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0005978	GO:GO:0006006	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009590
GO:GO:0009605	GO:GO:0009628	GO:GO:0009987	GO:GO:0010319	GO:GO:0016868	GO:GO:0019252
GO:GO:0019388	GO:GO:0071704	EntrezGene:LOC100247590	wikigene:LOC100247590	PFAM:PF00408	PFAM:PF02878
PFAM:PF02879	PFAM:PF02880	PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573	PANTHER:PTHR22573:SF47
SUPFAM:SSF53738	SUPFAM:SSF55957	UniParc:UPI0001984FC3	ArrayExpress:VIT_16s0022g02320	EnsemblPlantsGene:VIT_16s0022g02320	EnsemblPlants:VIT_16s0022g02320.t01
unigene:Vvi.13885	RefSeq:XP_002263813	RefSeq:XP_002263813.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:-:14878029..14896491

Molecular Weight (calculated)

66953.5 Da

IEP (calculated)

6.153

GRAVY (calculated)

-0.182

Length

614 amino acids

Sequence
(BLAST)

001: MDSVFFSTLK LTPLPNASFS NRHFASLSLL SRKFPIRRLS VKASSSAPST STANSQTIKI ISMPTKPIEG QKTGTSGLRK KVKVFIEENY LANWIQALFN
101: SLPPEDYKDG VLVLGGDGRY FNREAAQIII KIAAGNGVGK ILVGKEGIMS TPAVSAVIRK QKANGGFIMS ASHNPGGPEY DWGIKFNYSS GQPAPETITD
201: KIYGNTLSIS EIKMVDIPDI DLSCLGVTTY GNFSVEVVDP VSDYLELLEN VFDFQLIKGL LSRSDFRFTF DAMHAVTGAY AKPIFVDKLG ASPDSISNGV
301: PLEDFGHGHP DPNLTYAKDL VNIMYGVNGP DFGAASDGDG DRNMILGRSF FVTPSDSVAI IAANAQEAIP YFQSGPKGLA RSMPTSGALD RVAEKLTLPF
401: FEVPTGWKFF GNLMDAGKLS ICGEESFGTG SDHIREKDGI WAVLAWLSII AYRNKDKKPG EKLASVADVV KEHWATYGRN FFSRYDYEEC ESEGANKMIE
501: YLRDLVSKSK AGEKYGNYAL QFADDFSYTD PVDGSVASKQ GVRFVFTDGS RIIYRLSGTG SAGATVRIYI EQFEPDVSKH EMDAQAALKP LIDLALSLSK
601: LKDFTGREKP TVIT

Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)

001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT

Arabidopsis Description

PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.