Factsheet for Zm00001d044211_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03286	Sorghum	mitochondrion, plastid	88.41	87.83
Os10t0189100-01	Rice	plastid	84.93	84.24
GSMUA_Achr8P19110_001	Banana	plastid	76.82	74.0
VIT_16s0022g02320.t01	Wine grape	plastid	74.67	73.45
Bra028278.1-P	Field mustard	plastid	74.5	71.66
CDY64652	Canola	plastid	74.01	71.07
AT5G51820.1	Thale cress	plastid	72.85	70.63
CDY00500	Canola	plastid	74.17	70.55
KRH35404	Soybean	nucleus	73.01	70.22
Solyc03g006870.2.1	Tomato	plastid	73.01	69.78
KRG91417	Soybean	nucleus	72.35	69.59
Zm00001d033746_P003	Maize	plastid	54.14	50.46
Zm00001d013428_P002	Maize	plasma membrane	54.3	50.46
Zm00001d036664_P001	Maize	cytosol, mitochondrion	49.5	48.3
Zm00001d036666_P001	Maize	mitochondrion	44.21	44.57

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.2.2.2	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	UniProt:A0A1D6NJK9
InterPro:Alpha-D-phosphohexomutase_SF	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016868	GO:GO:0071704	ProteinID:ONM40447.1	PFAM:PF00408
PFAM:PF02878	PFAM:PF02879	PFAM:PF02880	PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573
PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957	UniParc:UPI000843BB47	EnsemblPlantsGene:Zm00001d044211	EnsemblPlants:Zm00001d044211_P001
EnsemblPlants:Zm00001d044211_T001	SEG:seg	:	:	:	:

Description

Phosphoglucomutase chloroplastic

Coordinates

chr3:+:221916358..221923940

Molecular Weight (calculated)

66079.7 Da

IEP (calculated)

6.249

GRAVY (calculated)

-0.115

Length

604 amino acids

Sequence
(BLAST)

001: MPTMHALRLC PLLSTIRSTP PRATAAARQG ALFVARCSSA GTPSAAQALK ISSIPTKPVE GQKTGTSGLR KKVKVFQQEN YLANWIQALF NSLPPEDYVG
101: ATLVLGGDGR YFNKEAAQII IKIAAGNGVQ KIIVGRNGLL STPAVSAVIR KRKANGGFIM SASHNPGGPD NDWGIKFNYS SGQPAPETIT DQIYGNTLSI
201: SEIKTADIPD TDLSSVGVVS YGDFAIEVID PVSDYLELME NVFDFQLIKD LLSRPDFRFI FDAMHAITGA YAGPIFVEKL GADPDCILNG VPLEDFGNGH
301: PDPNLTYVYQ FCYAKELVFT MFGTHAPDFG AASDGDGDRN MILGKRFFIT PSDSVAIIAA NAQTAIPYFQ FGTKGLARSM PTSGALDRVA EKLNVPFFEV
401: PTGWKFFGNL MDAGKLSICG EESFGTGSDH IREKDGIWAV LAWLSILAHR NKDKKVGERL VSVEDIAMEH WKTYGRNFFS RYDYEACESH SANQMMDHLR
501: DVMANSKPGE KYGNYTLQFA DDFSYTDPVD GSTVSKQGLR FVFTDGSRII FRLSGTGSAG ATIRLYIEQF ESDISKHSLD AQTALKPLIG YYLVLFHGIF
601: YIQL

Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)

001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT

Arabidopsis Description

PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.