Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028278.1-P Field mustard plastid 98.27 99.36
CDY64652 Canola plastid 97.32 98.25
AT5G51820.1 Thale cress plastid 86.61 88.28
VIT_16s0022g02320.t01 Wine grape plastid 79.69 82.41
KRG91417 Soybean nucleus 78.58 79.46
KRH35404 Soybean nucleus 78.11 78.98
Solyc03g006870.2.1 Tomato plastid 78.58 78.96
Os10t0189100-01 Rice plastid 74.96 78.16
EES03286 Sorghum mitochondrion, plastid 73.39 76.64
GSMUA_Achr8P19110_001 Banana plastid 74.8 75.76
Zm00001d044211_P001 Maize plastid 70.55 74.17
CDY41458 Canola plastid 53.23 57.98
CDX91702 Canola plastid 53.54 55.37
CDY04740 Canola plastid 47.87 52.14
CDY21421 Canola plastid 53.23 50.15
CDX91703 Canola endoplasmic reticulum 11.02 42.94
CDY52135 Canola extracellular, plasma membrane 10.24 41.94
Protein Annotations
KEGG:00520+5.4.2.10MapMan:3.2.2.2Gene3D:3.30.310.50Gene3D:3.40.120.10InterPro:A-D-PHexomutase_CInterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sfInterPro:A-D-PHexomutase_a/b/a-IInterPro:A-D-PHexomutase_a/b/a-I/II/IIIInterPro:A-D-PHexomutase_a/b/a-IIInterPro:A-D-PHexomutase_a/b/a-IIIGO:A0A078EEK9
InterPro:Alpha-D-phosphohexomutase_SFEnsemblPlants:CDY00500ProteinID:CDY00500ProteinID:CDY00500.1GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0004614GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005975GO:GO:0006006GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009536GO:GO:0016853GO:GO:0016868GO:GO:0046872GO:GO:0071704EnsemblPlantsGene:GSBRNA2T00110218001
PFAM:PF00408PFAM:PF02878PFAM:PF02879PFAM:PF02880PRINTS:PR00509ScanProsite:PS00710
PANTHER:PTHR22573PANTHER:PTHR22573:SF47MetaCyc:PWY-6749SUPFAM:SSF53738SUPFAM:SSF55957UniParc:UPI0004EE69B0
SEG:seg:::::
Description
BnaA10g07730D
Coordinates
chrLK031919:-:807903..812707
Molecular Weight (calculated)
69120.8 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.172
Length
635 amino acids
Sequence
(BLAST)
001: MSSTYARFDT VFLLSRFAGA KYSPLWPSSS SSSSSHSSLL SSGTHLRAKP NSRLRSVTAA SSGPIIAGSE SIEIKSLPTK PIEGQKTGTS GLRKKVKVFM
101: QDNYLANWIQ ALFNSLPLED YKDATLVLGG DGRYFNKEAS QIIIKIAAGN GVGKILVGQE GILSTPAVSA VIRKRKANGG FIMSASHNPG GPEYDWGIKF
201: NYSSGQPAPE SITDKIYGNT LSISEIKVAE IPDIDLSHVG VTKYGNFSVE VIDPVSDYLE LMEDVFDFDL IRGLLSRSDF GFMFDAMHAV TGAYAKPIFV
301: DNLGAKPDSI SNGVPLEDFG HGHPDPNLTY AKDLVDVMYR DDGPDFGAAS DGDGDRNMVL GNKFFVTPSD SVAIIAANAQ EAIPYFRAGP KGLARSMPTS
401: GALDRVAEKL KLPFFEVPTG WKFFGNLMDA GKLSICGEES FGTGSDHIRE KDGIWAVLAW LSILAHRNKD KKPGEKLVSV ADVVNEYWAT YGRNFFSRYD
501: YEECESEGAN KMIEYLRDIV AKSKAGVNYG NNVLQFADDF SYTDPVDGSV ASKQGVRFVF TDGSRIIFRL SGTGSAGATV RIYIEQFEPD VSKHDVDAQI
601: ALKPLIGSFL FFFHLALSVS KLKEFTGREK PTVIT
Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Arabidopsis Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.