Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00500 | Canola | plastid | 41.94 | 10.24 |
| CDY64652 | Canola | plastid | 41.29 | 10.17 |
| CDY04740 | Canola | plastid | 32.9 | 8.75 |
| CDY41458 | Canola | plastid | 30.32 | 8.06 |
| CDY21421 | Canola | plastid | 33.55 | 7.72 |
| CDX91702 | Canola | plastid | 30.32 | 7.65 |
| CDX91703 | Canola | endoplasmic reticulum | 5.16 | 4.91 |
Protein Annotations
| KEGG:00520+5.4.2.10 | Gene3D:3.40.120.10 | MapMan:35.1 | InterPro:A-D-PHexomutase_a/b/a-I/II/III | GO:A0A078IM33 | UniProt:A0A078IM33 |
| EnsemblPlants:CDY52135 | ProteinID:CDY52135 | ProteinID:CDY52135.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016868 |
| EnsemblPlantsGene:GSBRNA2T00004960001 | PANTHER:PTHR22573 | PANTHER:PTHR22573:SF47 | MetaCyc:PWY-6749 | SUPFAM:SSF53738 | TMHMM:TMhelix |
| UniParc:UPI0004EE939A | SEG:seg | : | : | : | : |
Description
BnaA03g55140DBnaA03g55140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM33]
Coordinates
chrLK033059:+:24204..26928
Molecular Weight (calculated)
17618.7 Da
IEP (calculated)
8.316
GRAVY (calculated)
0.405
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLENNFDV SKRFQCRKIL LLCFLAFVYC FFSYSVSLKS ITLNKYAYGL QNVFDFGLNG GLLSRARFGF MFVAMHAVTG SYARQNFVDY LGAKPDSIFN
101: GVPLEDFGHA SHGHPDPNLI YANWLMSCIV ATDLISELQV MMMVKQMVLG NKFFV
101: GVPLEDFGHA SHGHPDPNLI YANWLMSCIV ATDLISELQV MMMVKQMVLG NKFFV
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Arabidopsis Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.