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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028278.1-P Field mustard plastid 98.57 98.73
CDY00500 Canola plastid 98.25 97.32
AT5G51820.1 Thale cress plastid 86.96 87.8
VIT_16s0022g02320.t01 Wine grape plastid 80.76 82.74
KRG91417 Soybean nucleus 79.97 80.1
KRH35404 Soybean nucleus 79.01 79.14
Solyc03g006870.2.1 Tomato plastid 79.01 78.64
Os10t0189100-01 Rice plastid 75.68 78.16
EES03286 Sorghum mitochondrion, plastid 74.09 76.64
GSMUA_Achr8P19110_001 Banana plastid 75.68 75.92
Zm00001d044211_P001 Maize plastid 71.07 74.01
CDY41458 Canola plastid 53.58 57.8
CDX91702 Canola plastid 53.74 55.05
CDY04740 Canola plastid 48.17 51.97
CDY21421 Canola plastid 53.58 50.0
CDX91703 Canola endoplasmic reticulum 11.13 42.94
CDY52135 Canola extracellular, plasma membrane 10.17 41.29
Protein Annotations
KEGG:00520+5.4.2.10MapMan:3.2.2.2Gene3D:3.30.310.50Gene3D:3.40.120.10InterPro:A-D-PHexomutase_CInterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sfInterPro:A-D-PHexomutase_a/b/a-IInterPro:A-D-PHexomutase_a/b/a-I/II/IIIInterPro:A-D-PHexomutase_a/b/a-IIInterPro:A-D-PHexomutase_a/b/a-IIIGO:A0A078JGT8
UniProt:A0A078JGT8InterPro:Alpha-D-phosphohexomutase_SFEnsemblPlants:CDY64652ProteinID:CDY64652ProteinID:CDY64652.1GO:GO:0000287
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016868GO:GO:0071704EnsemblPlantsGene:GSBRNA2T00042494001PFAM:PF00408PFAM:PF02878PFAM:PF02879
PFAM:PF02880PRINTS:PR00509ScanProsite:PS00710PANTHER:PTHR22573PANTHER:PTHR22573:SF47MetaCyc:PWY-6749
SUPFAM:SSF53738SUPFAM:SSF55957UniParc:UPI0004EE5379SEG:seg::
Description
BnaCnng44490DBnaCnng44490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGT8]
Coordinates
chrLK034511:-:9894..14839
Molecular Weight (calculated)
68519.0 Da
IEP (calculated)
5.433
GRAVY (calculated)
-0.212
Length
629 amino acids
Sequence
(BLAST)
001: MSSTYARFDT VFLLSRFAGA KYSPLWPSSS SSSHSSLLSS GIHLRAKPNS RLRSVTGASS SSSGPIIAGS ESIEIKSLPT KPIEGQKTGT SGLRKKVKVF
101: MQDNYLANWI QALFNSLPLE DYKDATLVLG GDGRYFNKEA SQIIIKIAAG NGVGKILVGQ EGILSTPAVS AVIRKRKANG GFIMSASHNP GGPEYDWGIK
201: FNYSSGQPAP ESITDKIYGN TLSISEIKVA EIPDIDLSHV GVTKYGNFSV EVIDPISDYL ELMEDVFDFD LIRGLLSRSD FGFMFDAMHA VTGAYAKPIF
301: VDNLEAKPDS ISNGVPLEDF GHGHPDPNLT YAKDLVDVMY RDDGPDFGAA SDGDGDRNMV LGNKFFVTPS DSVAIIAANA QEAIPYFRAG PKGLARSMPT
401: SGALDRVAEK LKLPFFEVPT GWKFFGNLMD AGKLSICGEE SFGTGSDHIR EKDGIWAVLA WLSILAHRNK DKKPGEKLVS VADVVNEYWA TYGRNFFSRY
501: DYEECESEGA NKMIEYLRDI VAKSKAGENY GNYVLQFADD FSYTDPVDGS VASKQGVRFV FTDGSRIIYR LSGTGSAGAT VRIYIEQFEP DVSKHDVDAQ
601: IALKPLIDLA LSVSKLKEFT GREKPTVIT
Best Arabidopsis Sequence Match ( AT5G51820.1 )
(BLAST)
001: MTSTYTRFDT VFLFSRFAGA KYSPLLPSPS FTLSTSGIHI RTKPNSRFHS IIASSSSSSV VAGTDSIEIK SLPTKPIEGQ KTGTSGLRKK VKVFMEDNYL
101: ANWIQALFNS LPLEDYKNAT LVLGGDGRYF NKEASQIIIK IAAGNGVGQI LVGKEGILST PAVSAVIRKR KANGGFIMSA SHNPGGPEYD WGIKFNYSSG
201: QPAPETITDK IYGNTLSISE IKVAEIPDID LSQVGVTKYG NFSVEVIDPV SDYLELMEDV FDFDLIRGLL SRSDFGFMFD AMHAVTGAYA KPIFVDNLGA
301: KPDSISNGVP LEDFGHGHPD PNLTYAKDLV DVMYRDNGPD FGAASDGDGD RNMVLGNKFF VTPSDSVAII AANAQEAIPY FRAGPKGLAR SMPTSGALDR
401: VAEKLKLPFF EVPTGWKFFG NLMDAGKLSI CGEESFGTGS DHIREKDGIW AVLAWLSILA HRNKDTKPGD KLVSVADVVK EYWATYGRNF FSRYDYEECE
501: SEGANKMIEY LREILSKSKA GDVYGNYVLQ FADDFSYTDP VDGSVASKQG VRFVFTDGSR IIFRLSGTGS AGATVRIYIE QFEPDVSKHD VDAQIALKPL
601: IDLALSVSKL KDFTGREKPT VIT
Arabidopsis Description
PGMPPhosphoglucomutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.