Factsheet for Bra024568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016572.1-P
Bra031013.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23190.1	Bra016572.1-P	AT1G18040.1	20706207
AT1G23190.1	Bra031013.1-P	AT1G18040.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04740	Canola	plastid	98.8	98.8
Bra016357.1-P	Field mustard	plastid	87.48	87.48
AT1G23190.1	Thale cress	plastid	86.79	86.79
CDY21421	Canola	plastid	99.83	86.35
KRH60387	Soybean	endoplasmic reticulum	78.04	78.18
KRH41685	Soybean	nucleus	77.87	78.01
Solyc04g045340.2.1	Tomato	plastid	76.16	76.16
GSMUA_Achr8P30900_001	Banana	cytosol	76.16	76.16
KRH65519	Soybean	cytosol	32.93	75.59
Os03t0712700-01	Rice	plasma membrane	75.13	75.26
VIT_01s0011g05370.t01	Wine grape	cytosol, mitochondrion	79.59	74.72
GSMUA_Achr2P06680_001	Banana	cytosol	73.58	74.35
Zm00001d033746_P003	Maize	plastid	75.13	67.59
TraesCS4B01G047300.1	Wheat	plastid	74.96	67.44
Zm00001d013428_P002	Maize	plasma membrane	75.13	67.38
HORVU4Hr1G007620.2	Barley	plasma membrane	75.13	67.28
EER93574	Sorghum	plastid	74.61	67.03
TraesCS4A01G267000.1	Wheat	plastid	74.79	66.87
TraesCS4D01G047300.1	Wheat	plastid	74.1	66.46
Zm00001d036664_P001	Maize	cytosol, mitochondrion	66.55	62.68
KRH65565	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	16.47	59.63
Zm00001d036666_P001	Maize	mitochondrion	60.38	58.76
Bra028278.1-P	Field mustard	plastid	52.83	49.04

Protein Annotations

KEGG:00520+5.4.2.10	MapMan:3.1.2.5	Gene3D:3.30.310.50	Gene3D:3.40.120.10	InterPro:A-D-PHexomutase_C	InterPro:A-D-PHexomutase_CS
InterPro:A-D-PHexomutase_C_sf	InterPro:A-D-PHexomutase_a/b/a-I	InterPro:A-D-PHexomutase_a/b/a-I/II/III	InterPro:A-D-PHexomutase_a/b/a-II	InterPro:A-D-PHexomutase_a/b/a-III	InterPro:Alpha-D-phosphohexomutase_SF
EnsemblPlantsGene:Bra024568	EnsemblPlants:Bra024568.1	EnsemblPlants:Bra024568.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004614	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016868	GO:GO:0046686	GO:GO:0046872
GO:GO:0071704	UniProt:M4E713	PFAM:PF00408	PFAM:PF02878	PFAM:PF02879	PFAM:PF02880
PRINTS:PR00509	ScanProsite:PS00710	PANTHER:PTHR22573	PANTHER:PTHR22573:SF47	SUPFAM:SSF53738	SUPFAM:SSF55957
UniParc:UPI0002542A04	SEG:seg	:	:	:	:

Description

AT1G23190 (E=0.0) | phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative

Coordinates

chrA09:-:24342325..24346347

Molecular Weight (calculated)

63400.3 Da

IEP (calculated)

6.126

GRAVY (calculated)

-0.225

Length

583 amino acids

Sequence
(BLAST)

001: MVFKVSLVST SPIDGQKPGT SGLRKKVKVF KQPNYLHNFV QSTFNALTPE KVKGATLVVS GDGRYYSNDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGGFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAEDLP IVDISAIGVS SFEGPEGKFD VEVFDSADDY
201: VKLMKSIFDF ESIRKLLSSP KFSFCYDAMH GVAGAYAHRI FVEELGAQES SLLNCVPKED FGGGHPDPNL TYAKELVARM GLGKSDTGVE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAVGA IPYFSTGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWLS ILAHKNKETL DGDAKLVTVE DIVRKHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKMVK GIRSDVANVS SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESHEALSPL VDIALKLSKM EEFTGRSAPT VIT

Best Arabidopsis Sequence Match ( AT1G23190.1 )
(BLAST)

001: MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS
101: AVIRERSGAD GSKATGAFIL TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT SFEGPEGKFD VEVFDPADDY
201: VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG
301: DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD
401: GIWAVLAWMS ILAHKNKGNI DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK GIRSDVASVA SADEFEYKDP
501: VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

Arabidopsis Description

PGM3Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.