Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45949 | Canola | cytosol | 41.67 | 80.0 |
| Bra020699.1-P | Field mustard | cytosol | 41.25 | 79.2 |
| Bra033228.1-P | Field mustard | cytosol | 41.25 | 79.2 |
| Bra014458.1-P | Field mustard | cytosol | 40.42 | 77.6 |
| Bra031020.1-P | Field mustard | cytosol | 40.42 | 77.6 |
| CDX90381 | Canola | cytosol | 42.5 | 74.45 |
| CDY31721 | Canola | cytosol | 41.67 | 72.99 |
| CDY30813 | Canola | cytosol | 41.25 | 72.26 |
| CDY23135 | Canola | cytosol | 40.42 | 68.31 |
| Bra014459.1-P | Field mustard | cytosol | 42.08 | 22.3 |
| Bra033531.1-P | Field mustard | cytosol | 63.33 | 17.1 |
| CDY32212 | Canola | cytosol | 63.75 | 15.47 |
| CDY34427 | Canola | cytosol | 63.75 | 15.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 62.92 | 15.21 |
| AT4G16130.1 | Thale cress | cytosol | 63.75 | 14.73 |
| CDY52046 | Canola | cytosol | 2.08 | 3.94 |
| GSMUA_Achr3P05470_001 | Banana | cytosol | 12.5 | 3.55 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P05480_001 | EnsemblPlants:GSMUA_Achr3T05480_001 | EnsemblPlantsGene:GSMUA_Achr3G05480_001 | Gene3D:3.40.50.2000 | PANTHER:PTHR38134 | PFAM:PF13528 |
| SEG:seg | SUPFAM:SSF53756 | UniParc:UPI00029490B5 | UniProt:M0SC16 | MapMan:3.13.7.2.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G05480_001]
Coordinates
chr3:-:3656873..3659340
Molecular Weight (calculated)
24961.0 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.177
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIADGGGGV SASREHLVFA YYVTGHGFGH ATRVVEVVWH LIAAGHDVHV VTGAPDSVFT SNIQSPNLYL RKVLLDCGAV QADALTVDRL ASLEKYHQTA
101: VVPRASILAA EVEWLKSIKA DLVVSDVVPV ACRAAVDAGI RSVCVTNFSL LTEKQGSRGE QGSGSNGGSG KGSDEQREAR AATATAFASS GSGSRSGEQR
201: EARAATEAAF VSCDSGEQRQ REQERRAAGG TSGDRGSVCE
101: VVPRASILAA EVEWLKSIKA DLVVSDVVPV ACRAAVDAGI RSVCVTNFSL LTEKQGSRGE QGSGSNGGSG KGSDEQREAR AATATAFASS GSGSRSGEQR
201: EARAATEAAF VSCDSGEQRQ REQERRAAGG TSGDRGSVCE
0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
Arabidopsis Description
ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.