Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90381 | Canola | cytosol | 95.62 | 95.62 |
| CDY31721 | Canola | cytosol | 94.16 | 94.16 |
| CDY23135 | Canola | cytosol | 81.02 | 78.17 |
| CDY45949 | Canola | cytosol | 68.61 | 75.2 |
| Bra020699.1-P | Field mustard | cytosol | 67.15 | 73.6 |
| Bra033228.1-P | Field mustard | cytosol | 67.15 | 73.6 |
| Bra014458.1-P | Field mustard | cytosol | 64.96 | 71.2 |
| Bra031020.1-P | Field mustard | cytosol | 64.96 | 71.2 |
| GSMUA_Achr3P05480_001 | Banana | cytosol | 72.26 | 41.25 |
| Bra014459.1-P | Field mustard | cytosol | 64.96 | 19.65 |
| CDY32212 | Canola | cytosol | 86.13 | 11.93 |
| CDY34427 | Canola | cytosol | 86.13 | 11.93 |
| CDY57963 | Canola | cytosol | 62.77 | 8.86 |
| CDY17385 | Canola | cytosol, plastid | 62.04 | 8.74 |
| CDY52045 | Canola | cytosol | 4.38 | 5.71 |
| CDY22782 | Canola | plastid | 3.65 | 2.69 |
| CDY45132 | Canola | plastid | 3.65 | 2.69 |
| CDX73555 | Canola | cytosol | 2.19 | 1.2 |
| CDY71091 | Canola | cytosol | 0.73 | 1.19 |
| CDY52046 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY30813 | EnsemblPlantsGene:GSBRNA2T00046261001 | PANTHER:PTHR38134 | ProteinID:CDY30813 | ProteinID:CDY30813.1 | UniParc:UPI0004EE0D98 |
| UniProt:A0A078H1W7 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g21890DBnaC05g21890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1W7]
Coordinates
chrLK032261:+:213060..213873
Molecular Weight (calculated)
14954.1 Da
IEP (calculated)
7.508
GRAVY (calculated)
0.150
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIDDNEGVS APSKHLVLAY YVTGHGFGHA TRVVEPGMTF MSSPARLISE IQSPRLKIRK VLLDCGAVQA DALTVDRLAS LEKYVETTVV PRAEILKTEV
101: EWLHSIKTDF VVSDVVPVAC RAAADAGIRS VCVTNFR
101: EWLHSIKTDF VVSDVVPVAC RAAADAGIRS VCVTNFR
001: MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP
101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV
201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR
301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP
401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD
501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT
601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL
701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE
801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA
901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT
101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV
201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR
301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP
401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD
501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT
601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL
701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE
801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA
901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT
Arabidopsis Description
Mevalonate/galactokinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.