CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71091	Canola	cytosol	27.6	82.14
PGSC0003DMT400076000	Potato	cytosol, nucleus, plastid	21.6	64.29
VIT_11s0065g00300.t01	Wine grape	nucleus	54.8	57.56
CDY22782	Canola	plastid	25.2	33.87
CDY45132	Canola	plastid	25.2	33.87
CDY52045	Canola	cytosol	12.0	28.57
CDY52046	Canola	cytosol	14.0	27.56
CDY17385	Canola	cytosol, plastid	83.6	21.5
CDY57963	Canola	cytosol	82.4	21.22
CDY34427	Canola	cytosol	57.6	14.56
CDY32212	Canola	cytosol	57.2	14.46
KRH04897	Soybean	cytosol	57.2	14.16
KRH16180	Soybean	cytosol	56.8	14.05
CDY45949	Canola	cytosol	2.4	4.8
CDY23135	Canola	cytosol	1.6	2.82
CDY31721	Canola	cytosol	1.2	2.19
CDY30813	Canola	cytosol	1.2	2.19
CDX90381	Canola	cytosol	1.2	2.19

Protein Annotations

EnsemblPlants:CDX73555	EnsemblPlantsGene:GSBRNA2T00109087001	Gene3D:3.30.70.890	InterPro:GHMP_kinase_C_dom	InterPro:GHMP_kinase_C_sf	InterPro:IPR036554
KEGG:00052+2.7.1.6	KEGG:00520+2.7.1.6	MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6527	PANTHER:PTHR10457
PANTHER:PTHR10457:SF19	PFAM:PF08544	ProteinID:CDX73555	ProteinID:CDX73555.1	SEG:seg	SUPFAM:SSF55060
UniParc:UPI0004EE7F7A	UniPathway:UPA00214	MapMan:35.1	:	:	:

Description

BnaC08g24480D

Coordinates

chrLK031799:+:1141502..1143547

Molecular Weight (calculated)

28091.6 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.364

Length

250 amino acids

Sequence
(BLAST)

001: MRLLGAGVCK TPHSFYKEFD YLLCDLKYVA NLGNRFWNTT QCWWFRLCSE LIEYDASLDY LCNLSPHRFQ ALYASKLPQS ITGEEFMEKY GDHGDSVTTT
101: NRKGTYHIMA PTKHPIYENF RVQAFKALLT ATPSEEQVIG LGELMYQCHD SYSPCGLGSD GTDRLVQKME RLKHSKTENG TLYGAKITGG GSGGTVCVIG
201: RSSLRSSELI LMYIYKEATG FMPYVFEGSS PGAGKFRYLK IRKNSAPPPT

Best Arabidopsis Sequence Match ( AT3G42850.1 )
(BLAST)

001: MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP
101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV
201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR
301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP
401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD
501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT
601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL
701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE
801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA
901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT

Arabidopsis Description

Mevalonate/galactokinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.