CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020699.1-P	Field mustard	cytosol	98.4	98.4
Bra033228.1-P	Field mustard	cytosol	98.4	98.4
Bra014458.1-P	Field mustard	cytosol	96.0	96.0
Bra031020.1-P	Field mustard	cytosol	96.0	96.0
CDX90381	Canola	cytosol	78.4	71.53
CDY31721	Canola	cytosol	77.6	70.8
CDY30813	Canola	cytosol	75.2	68.61
CDY23135	Canola	cytosol	71.2	62.68
GSMUA_Achr3P05480_001	Banana	cytosol	80.0	41.67
Bra014459.1-P	Field mustard	cytosol	96.0	26.49
CDY32212	Canola	cytosol	97.6	12.34
CDY34427	Canola	cytosol	97.6	12.34
CDY57963	Canola	cytosol	69.6	8.96
CDY17385	Canola	cytosol, plastid	69.6	8.95
CDY22782	Canola	plastid	6.4	4.3
CDY45132	Canola	plastid	6.4	4.3
CDY52045	Canola	cytosol	2.4	2.86
CDX73555	Canola	cytosol	4.8	2.4
CDY71091	Canola	cytosol	0.8	1.19
CDY52046	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY45949	EnsemblPlantsGene:GSBRNA2T00082949001	PANTHER:PTHR38134	PFAM:PF13528	ProteinID:CDY45949	ProteinID:CDY45949.1
SUPFAM:SSF53756	UniParc:UPI0004EDD0F9	UniProt:A0A078I977	MapMan:35.1	:	:

Description

BnaA02g17750DBnaA02g17750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I977]

Coordinates

chrLK032643:-:70779..71816

Molecular Weight (calculated)

13739.6 Da

IEP (calculated)

7.710

GRAVY (calculated)

0.241

Length

125 amino acids

Sequence
(BLAST)

001: MRIDDNEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV IGAPDFVFTS EIQSPRLKIR KYVETAVIPR AEILKTEVEW LHSIKADFVV
101: SDVVPVACRA AADAGIRSVC VTNFR

Best Arabidopsis Sequence Match ( AT3G42850.1 )
(BLAST)

001: MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP
101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV
201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR
301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP
401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD
501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT
601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL
701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE
801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA
901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT

Arabidopsis Description

Mevalonate/galactokinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.