CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90381	Canola	cytosol	96.35	96.35
CDY30813	Canola	cytosol	94.16	94.16
CDY23135	Canola	cytosol	81.02	78.17
Bra020699.1-P	Field mustard	cytosol	70.8	77.6
Bra033228.1-P	Field mustard	cytosol	70.8	77.6
CDY45949	Canola	cytosol	70.8	77.6
Bra014458.1-P	Field mustard	cytosol	68.61	75.2
Bra031020.1-P	Field mustard	cytosol	68.61	75.2
GSMUA_Achr3P05480_001	Banana	cytosol	72.99	41.67
Bra014459.1-P	Field mustard	cytosol	68.61	20.75
CDY32212	Canola	cytosol	86.86	12.03
CDY34427	Canola	cytosol	86.86	12.03
CDY57963	Canola	cytosol	63.5	8.96
CDY17385	Canola	cytosol, plastid	63.5	8.95
CDY52045	Canola	cytosol	3.65	4.76
CDY22782	Canola	plastid	3.65	2.69
CDY45132	Canola	plastid	3.65	2.69
CDX73555	Canola	cytosol	2.19	1.2
CDY71091	Canola	cytosol	0.73	1.19
CDY52046	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY31721	EnsemblPlantsGene:GSBRNA2T00050354001	PANTHER:PTHR38134	ProteinID:CDY31721	ProteinID:CDY31721.1	SEG:seg
UniParc:UPI0004EF1A47	UniProt:A0A078H1R0	MapMan:35.1	:	:	:

Description

BnaA04g16570DBnaA04g16570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1R0]

Coordinates

chrLK032278:+:56142..56960

Molecular Weight (calculated)

15049.2 Da

IEP (calculated)

6.507

GRAVY (calculated)

0.230

Length

137 amino acids

Sequence
(BLAST)

001: MRIDDNEGVS ASSKHLVFAY YVTGHGFGHA TRVVEPGMTF MSSPARLISE IQSPRLKIRK VLLDCGAVQA DALTVDRLAS LEKYVETAVI PRAEILETEV
101: EWLHSIKVDF VVFDVVPVAC RAAADAGIRS VCVTNFR

Best Arabidopsis Sequence Match ( AT3G42850.1 )
(BLAST)

001: MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP
101: RDSILATEAE WLKSIKANLV VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI RLPGYCPMPA FHDVIDIPLV
201: VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR
301: FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE VAAKILQDTA MGKKRSKLNL SGARRLRDAI ILGFQLQRAP
401: GRDLSVPEWY QVAGNEAGIP SVDQTQKPSK FVEGFEILHG DHHGLSDTIG FLDSLATLAK IGGHHQEREH LAAAALFNWE EDIVVARAPG RLDVMGGIAD
501: YSGSLVLLMP TREACHAAVQ RNHPSKQKLW KHAEARHHSR DTPILEIVSF GSELSNRGPT FDMDLSDFME EDGKPISYDK AYHYFSRDPS QKWAAYVAGT
601: ILVLMREMDV RFEDSISILV SSTVPEGKGV SSSASVEVAT MSAVAAAHGL EISPRDVALL CQKVENYVVG APCGVMDQMA SACGEANKLL AMICQPAEIL
701: GLVEIPSHIR FWGIDSGIRH SVGGSDYGSV RIGAFIGKTM IRSFAASFAE TNSEEAEEES SELIESDTSL DYLCNLSPHR FQALYASKLP QSITGEEFLE
801: KYGDHGDSVT TIDKDGTYAI MAPTRHPIYE NFRVQAFKAL LTATPSEEQV IGLGELMYQC HDSYSACGIG SDGTDRLVRL VQNMENLKSS KTENGTLYGA
901: KITGGGSGGT VCVIGKSSLR SSEQILQIQQ KYKEATGFMP YVFEGSSPGA GKFGYLKIRK NSAT

Arabidopsis Description

Mevalonate/galactokinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.