CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
plasma membrane 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038046.1-P	Field mustard	plastid	100.0	100.0
CDY22782	Canola	plastid	100.0	100.0
CDY52045	Canola	cytosol	22.58	40.0
VIT_11s0065g00300.t01	Wine grape	nucleus	40.86	31.93
CDX73555	Canola	cytosol	33.87	25.2
CDY52046	Canola	cytosol	14.52	21.26
PGSC0003DMT400076000	Potato	cytosol, nucleus, plastid	9.14	20.24
CDY71091	Canola	cytosol	8.06	17.86
CDY32212	Canola	cytosol	61.29	11.53
CDY34427	Canola	cytosol	61.29	11.53
KRH04897	Soybean	cytosol	50.0	9.21
KRH16180	Soybean	cytosol	48.92	9.0
CDY57963	Canola	cytosol	44.09	8.44
CDY17385	Canola	cytosol, plastid	44.09	8.44
CDY45949	Canola	cytosol	4.3	6.4
CDY30813	Canola	cytosol	2.69	3.65
CDY31721	Canola	cytosol	2.69	3.65
CDX90381	Canola	cytosol	2.69	3.65
CDY23135	Canola	cytosol	2.69	3.52

Protein Annotations

EnsemblPlants:CDY45132	EnsemblPlantsGene:GSBRNA2T00081538001	InterPro:GHMP_kinase_C_sf	InterPro:IPR036554	KEGG:00052+2.7.1.6	KEGG:00520+2.7.1.6
MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6527	PANTHER:PTHR10457	PANTHER:PTHR10457:SF19	ProteinID:CDY22782.1
ProteinID:CDY45132	ProteinID:CDY45132.1	SUPFAM:SSF55060	UniParc:UPI0002545DE5	UniPathway:UPA00214	UniProt:A0A078GCJ0
MapMan:35.1	:	:	:	:	:

Description

BnaA09g14600DBnaA08g06120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCJ0]

Coordinates

chrLK032616:+:2404..3436

Molecular Weight (calculated)

20153.6 Da

IEP (calculated)

9.493

GRAVY (calculated)

-0.529

Length

186 amino acids

Sequence
(BLAST)

001: MSVPPPFALS RVGSGQIWGG FWIAPRGPHP SFKPQYLGKL VGSRGKATKH THGQTYSFQT FVDEYSDHGG AMWVGGGSAI HDDPVTVIDE KRTYNVKAPA
101: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRRVQLVQGM QHNKSKTDDG TSDGAKITSG GSGYWP

Best Arabidopsis Sequence Match ( AT4G16130.1 )
(BLAST)

0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL

Arabidopsis Description

ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.