Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076000 | Potato | cytosol, nucleus, plastid | 25.63 | 72.62 |
| CDY71091 | Canola | cytosol | 25.21 | 71.43 |
| CDX73555 | Canola | cytosol | 57.56 | 54.8 |
| Bra038046.1-P | Field mustard | plastid | 31.93 | 40.86 |
| CDY22782 | Canola | plastid | 31.93 | 40.86 |
| CDY45132 | Canola | plastid | 31.93 | 40.86 |
| CDY52045 | Canola | cytosol | 14.71 | 33.33 |
| VIT_04s0008g02830.t01 | Wine grape | cytosol | 70.17 | 16.67 |
| KRH04897 | Soybean | cytosol | 63.87 | 15.05 |
| KRH16180 | Soybean | cytosol | 63.03 | 14.84 |
| VIT_11s0065g00240.t01 | Wine grape | cytosol, mitochondrion | 5.04 | 4.84 |
| VIT_11s0065g00290.t01 | Wine grape | cytosol | 6.72 | 2.68 |
Protein Annotations
| ArrayExpress:VIT_11s0065g00300 | EMBL:FN595502 | EnsemblPlants:VIT_11s0065g00300.t01 | EnsemblPlantsGene:VIT_11s0065g00300 | Gene3D:3.30.70.890 | InterPro:GHMP_kinase_C_dom |
| InterPro:GHMP_kinase_C_sf | InterPro:IPR036554 | PANTHER:PTHR10457 | PANTHER:PTHR10457:SF19 | PFAM:PF08544 | ProteinID:CCB48914 |
| ProteinID:CCB48914.1 | SEG:seg | SUPFAM:SSF55060 | UniParc:UPI000210842F | UniProt:F6H9P5 | MapMan:35.1 |
Description
No Description!
Coordinates
chr11:+:13940073..13975097
Molecular Weight (calculated)
26448.2 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.418
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEISSYSL ANGNSDWQVC AMNSDEMEKD GRELLEVEAS LDYLCNLSPH RYEAVFAKKL PEYITGEAFM EKYVDHEDSV TVIDQKRNYA VRASTRHPIY
101: ENFRVKAFKA LLSATTSNEQ LYALGELMYQ CHYSYSACGL GSDGTDRLVK LVQEMQHSKS YRSGNGSLYG AKITGGGSGG TVCVIGSNCL RSSQQILEIQ
201: QRYKDATGFM PFIFEGSSPG AAKFGYLKIR RRSPANPI
101: ENFRVKAFKA LLSATTSNEQ LYALGELMYQ CHYSYSACGL GSDGTDRLVK LVQEMQHSKS YRSGNGSLYG AKITGGGSGG TVCVIGSNCL RSSQQILEIQ
201: QRYKDATGFM PFIFEGSSPG AAKFGYLKIR RRSPANPI
0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL
Arabidopsis Description
ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.