Factsheet for VIT_11s0065g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P05470_001	Banana	cytosol	57.79	40.88
OQU77002	Sorghum	cytosol, plasma membrane, plastid	56.11	39.46
VIT_04s0008g02830.t01	Wine grape	cytosol	64.49	38.42
GSMUA_Achr10P...	Banana	mitochondrion	63.15	37.97
TraesCS7A01G417000.1	Wheat	cytosol	60.8	36.82
TraesCS7B01G317000.1	Wheat	cytosol	60.97	36.73
TraesCS7D01G410100.1	Wheat	cytosol	61.14	36.72
HORVU7Hr1G096680.5	Barley	cytosol	60.3	36.62
EES06260	Sorghum	cytosol	61.31	36.49
Solyc07g016170.2.1	Tomato	plastid	59.8	36.43
CDY17385	Canola	cytosol, plastid	59.3	36.42
AT3G42850.2	Thale cress	plastid	59.3	36.38
Bra002849.1-P	Field mustard	plastid	59.13	36.32
CDY57963	Canola	cytosol	58.96	36.25
Zm00001d053886_P001	Maize	cytosol	60.3	36.18
TraesCS6A01G112800.1	Wheat	golgi, unclear	59.63	36.07
KRH04897	Soybean	cytosol	60.64	35.84
KRH16180	Soybean	cytosol	60.64	35.81
TraesCS6B01G141400.1	Wheat	cytosol	59.3	35.79
TraesCS6D01G102400.1	Wheat	cytosol	59.3	35.79
Os02t0141300-01	Rice	cytosol, plasma membrane	59.46	35.64
Zm00001d014689_P006	Maize	plastid	57.79	35.17
Os06t0702500-01	Rice	plastid	58.46	35.11
HORVU6Hr1G020380.1	Barley	mitochondrion	58.96	34.82
PGSC0003DMT400025322	Potato	cytosol	9.21	18.27
Zm00001d052587_P001	Maize	cytosol	1.34	8.99
Zm00001d044084_P001	Maize	plastid	2.68	7.14
VIT_11s0065g00300.t01	Wine grape	nucleus	2.68	6.72
VIT_11s0065g00240.t01	Wine grape	cytosol, mitochondrion	2.18	5.24

Protein Annotations

KEGG:00052+2.7.1.6	KEGG:00520+2.7.1.6	MapMan:3.13.7.2.1	Gene3D:3.30.230.10	EMBL:AM429540	EMBL:AM431821
EMBL:AM453221	EMBL:AM458187	EMBL:AM477688	EMBL:AM479076	ProteinID:CAN69179	ProteinID:CAN69179.1
ProteinID:CAN69286	ProteinID:CAN69286.1	ProteinID:CAN69964	ProteinID:CAN69964.1	ProteinID:CAN70129	ProteinID:CAN70129.1
ProteinID:CAN70808	ProteinID:CAN70808.1	ProteinID:CAN77448	ProteinID:CAN77448.1	ProteinID:CCB48913	ProteinID:CCB48913.1
UniProt:F6H9P4	EMBL:FN595502	InterPro:GHMP_kinase_N_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005524	GO:GO:0005534	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005730	GO:GO:0005732	GO:GO:0006139	GO:GO:0006259	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0015074	GO:GO:0030246
GO:GO:0034457	InterPro:GalKase_gal-bd	InterPro:IPR014721	PFAM:PF00288	PFAM:PF10509	PRINTS:PR00959
PANTHER:PTHR10457	PANTHER:PTHR10457:SF19	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	SUPFAM:SSF54211	UniParc:UPI000210842E
ArrayExpress:VIT_11s0065g00290	EnsemblPlantsGene:VIT_11s0065g00290	EnsemblPlants:VIT_11s0065g00290.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:13921828..13939838

Molecular Weight (calculated)

65898.3 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.058

Length

597 amino acids

Sequence
(BLAST)

001: MDWDNNVPSH APGPENNIDI VYMAMCHPSL AASWLEFKKG VSTCRLALFG KIGYGTFSEA LAYKLPFVFV RRDYFNEEPF LRNMLEYYQG GIEMIRRDFL
101: TGRWIPYLER AISLKPCYQG GSNGGEVAAC ILQDTAVGKH YASDKFSGAR RLQDAIVLGY QLQRAVGKDI CIPYWYSLAA NELSLHTALP TIETTKTTSI
201: TEVCTENFEI LHGDIHGLSD TASFLKSLAR LDASYDSGKN TKCQMRERVA AAALFNWEEE IFVARAPGRL DVMGGIADYS GSLVLQMPIR EACHVAVQKN
301: DPSKQKLWKH VQARQHIDGQ GPKPILQIVS FGSELSNRGP TFDMDLSDFL QGEQPISYKK AKEYFARDPA QKWAAYVAGT ILVLMRELGV RFENSISIVV
401: SSAVPEGKGV SSSAAVEVAS MSAIAASHGL NIAPRDLALL CQKACICLIS FVENHIVGAP CGVMDQMASV CGEANKLLAM VCQPAEVLGL VEIPSHIQFW
501: GIDSGIRHRF GKDEQMKLIC DNQAALHIAS NPVFHERTKH IEVDCHFIRE KIASGCIATS FVNSNDQLAD IFTKSLRGPR IKYICNKLGA YDVYAPA

Best Arabidopsis Sequence Match ( AT4G16130.1 )
(BLAST)

0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL

Arabidopsis Description

ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.