CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053886_P001	Maize	cytosol	94.62	95.38
Os02t0141300-01	Rice	cytosol, plasma membrane	90.83	91.47
TraesCS6A01G112800.1	Wheat	golgi, unclear	87.94	89.36
TraesCS6B01G141400.1	Wheat	cytosol	87.94	89.18
TraesCS6D01G102400.1	Wheat	cytosol	87.54	88.78
HORVU6Hr1G020380.1	Barley	mitochondrion	87.84	87.14
Zm00001d052587_P001	Maize	cytosol	7.58	85.39
OQU77002	Sorghum	cytosol, plasma membrane, plastid	66.7	78.8
GSMUA_Achr10P...	Banana	mitochondrion	77.87	78.65
GSMUA_Achr3P05470_001	Banana	cytosol	64.21	76.3
KRH04897	Soybean	cytosol	71.78	71.29
KRH16180	Soybean	cytosol	71.59	71.02
AT3G42850.2	Thale cress	plastid	68.49	70.61
CDY17385	Canola	cytosol, plastid	67.6	69.75
Bra002849.1-P	Field mustard	plastid	67.6	69.75
CDY57963	Canola	cytosol	67.5	69.72
Solyc07g016170.2.1	Tomato	plastid	66.6	68.16
PGSC0003DMT400025322	Potato	cytosol	19.74	65.78
VIT_11s0065g00290.t01	Wine grape	cytosol	36.49	61.31
Zm00001d044084_P001	Maize	plastid	9.27	41.52

Protein Annotations

KEGG:00520+2.7.1.46	MapMan:3.13.7.2.1	Gene3D:3.30.230.10	Gene3D:3.30.70.890	Gene3D:3.40.50.2000	EntrezGene:8062825
EntrezGene:8069954	UniProt:C5XUJ9	EnsemblPlants:EES06260	ProteinID:EES06260	ProteinID:EES06260.2	InterPro:GHMP_kinase_C_sf
InterPro:GHMP_kinase_N_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	InterPro:Galk_glycosyltransferase	InterPro:IPR014721
InterPro:IPR036554	PFAM:PF00288	PFAM:PF13528	PIRSF:PIRSF036399	PRINTS:PR00959	PANTHER:PTHR10457
PANTHER:PTHR10457:SF12	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	EnsemblPlantsGene:SORBI_3004G037900	SUPFAM:SSF53756	SUPFAM:SSF54211
SUPFAM:SSF55060	unigene:Sbi.19740	unigene:Sbi.21039	UniParc:UPI000B8B9C53	RefSeq:XP_002453284.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:3080556..3090663

Molecular Weight (calculated)

110332.0 Da

IEP (calculated)

6.646

GRAVY (calculated)

-0.168

Length

1003 amino acids

Sequence
(BLAST)

0001: MRVRDGDGGG EVTAPPQHLV FAYYITGHGF GHATRALEVV RHLVAAGHDV HVVTAAPEFV FTTEITSPSL HIRKVLLDCG AVQADALTVD RLASLEKYHQ
0101: TAVVPRESIL RTEAEWLNSI KADLVVSDVV PVACRAAADA GIRSVCVTNF SWDFIYAEYV VAAGHHHRSI VWQIAEDYSH CEFLLRLPGY CPMPAFRDVI
0201: DVPLVVRRLH RSRSEVRKEL GIADDVKLVI FNFGGQPAGW ELKKEWLPDG WLCLVCGASD TQKLPPNFIK LAKDAYTPDL MAASDCMLGK IGYGTVSEAL
0301: AYKLPFVFVR RDYFNEEPFL RNMLEHYQCG IEMIRRDLLT GHWKPYLQRA ITLQPCYDGP INGGEVAAHI LQDTAVGKKY ISGKLSGARR LRDAIVLGYQ
0401: LQRAPGRDVG IPDWYSLSEK EISVRPTPTS HDMNGSAESS FEDFEILHGD MQGLTDTMSF LKSLSGLVGN DLRSPEKQTR ERAAASVLFD WEEEIYVARA
0501: PGRLDVMGGI ADYSGSLVLQ GPFCNFSLHK MPIREACHVA VQRSDPTKQK QWKHTQARQL ANGGAVPVLQ IVSFGSELSN RAPTFDMDLS DFMDGDKPIS
0601: YDKAKEYFSR DPSQKWAAYV AGTIFVLMSE LGVRFTDSMS ILVSSSVPEG KGVSSSASVE VASMSAIAAA YGLNIAPRDL ALLCQKVENR VVGAPCGVMD
0701: QMTSACGEAN KLLAMVCQPA EVKELVSIPT HIRFWGLDSG IRHSVGGTDY GSVRVGTYMG RKMIKCAASD LLSELLPSCT SMQSGDSNPD EYEEHGVDLL
0801: KSEASMEYLC NLPPHRYEAV YAKDIPETIT GDVFLEKYGD HNDAVTEVDR KRSYCVRAPT RHPIYENSRV EAFKALLTAS KTDEQLSALG ELMFQCHYSY
0901: NACGLGSDGT DRLVNLVQEI RHRKTLRTGG PSLFGAKITG GGSGGSVCVI GKNCLKSSEE ILEIQKRYKA ATGYLPIVFE GSSPGACKFG YLKIRRRSTS
1001: PSN

Best Arabidopsis Sequence Match ( AT4G16130.1 )
(BLAST)

0001: MSERAKLQKK KKVTEDLLDS LLLLPPWRNF AISQSHQSII ESSSQRLPEK MRIDENEGVS ASSKHLVFAY YVTGHGFGHA TRVVEVVRHL IAAGHDVHVV
0101: TGAPDFVFTS EIQSPRLKIR KVLLDCGAVQ ADALTVDRLA SLEKYVETAV VPRAEILETE VEWLHSIKAD FVVSDVVPVA CRAAADAGIR SVCVTNFSWD
0201: FIYAEYVMAA GYHHRSIVWQ IAEDYSHCEF LIRLPGYCPM PAFRDVIDVP LVVRRLHKSR KEVRKELGIA EDVNVVILNF GGQPSGWNLK ETSLPTGWLC
0301: LVCGASETLE LPPNFIKLAK DAYTPDIIAA SDCMLGKIGY GTVSEALSYK VPFVFVRRDY FNEEPFLRNM LEFYQCGVEM IRRDLLMGQW TPYLERAVSL
0401: KPCYEGGING GEIAAHILQE TAIGRHCASD KLSGARRLRD AIILGYQLQR VPGRDIAIPE WYSRAENELG QSAGSSPTVQ ANENNSLVES CIDDFDILQG
0501: DVQGLSDTCT FLKSLAMLDA IHDSEKSTEK KTVRERKAAG GLFNWEEEIF VARAPGRLDV MGGIADYSGS LVLQMPIREA CHVAVQRNLP GKHRLWKHAQ
0601: ARQQAKGQVP TPVLQIVSYG SEISNRAPTF DMDLSDFMDG DEPISYEKAR KFFAQDPAQK WAAYVAGTIL VLMIELGVRF EDSISLLVSS AVPEGKGVSS
0701: SAAVEVASMS AIAAAHGLSI DPRDLAILCQ KVENHIVGAP CGVMDQMTSS CGEANKLLAM ICQPAEVVGL VEIPNHVRFW GIDSGIRHSV GGADYRSVRV
0801: GAYMGRKMIK SMASSILSPS ASSANGGNPE ELEDEGIDLL EAEASLDYLC NLSPHRYEAR YADKLPDIML GQTFIEEYAD HDDPVTVIDQ KRSYSVKAPA
0901: RHPIYENFRV KTFKALLTSA TSDEQLTALG GLLYQCHYSY SACGLGSDGT NRLVQLVQGM QHNKSNSEDG TLYGAKITGG GSGGTVCVVG RNSLRSSQQI
1001: LEIQQRYKAA TGYLPLIFEG SSPGAGKFGY LRIRRRISL

Arabidopsis Description

ARA1L-arabinokinase [Source:UniProtKB/Swiss-Prot;Acc:O23461]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.